Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.5■□□□□ 0.71
RPL3P39023 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RPL3P39023 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.5■□□□□ 0.71
RPL3P39023 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.5■□□□□ 0.71
RPL3P39023 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.5■□□□□ 0.71
RPL3P39023 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.5■□□□□ 0.71
RPL3P39023 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RPL3P39023 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPL3P39023 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPL3P39023 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.5■□□□□ 0.71
RPL3P39023 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPL3P39023 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RPL3P39023 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPL3P39023 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPL3P39023 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPL3P39023 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RPL3P39023 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.49■□□□□ 0.71
RPL3P39023 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RPL3P39023 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RPL3P39023 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.49■□□□□ 0.71
RPL3P39023 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPL3P39023 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RPL3P39023 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.49■□□□□ 0.71
RPL3P39023 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.49■□□□□ 0.71
RPL3P39023 KRT18P14-201ENST00000534205 1250 ntBASIC19.49■□□□□ 0.71
RPL3P39023 SLC7A5P1-201ENST00000568957 537 ntBASIC19.49■□□□□ 0.71
RPL3P39023 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.49■□□□□ 0.71
RPL3P39023 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.49■□□□□ 0.71
RPL3P39023 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.49■□□□□ 0.71
RPL3P39023 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPL3P39023 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RPL3P39023 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RPL3P39023 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
RPL3P39023 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPL3P39023 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPL3P39023 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.48■□□□□ 0.71
RPL3P39023 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPL3P39023 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPL3P39023 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RPL3P39023 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPL3P39023 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.48■□□□□ 0.71
RPL3P39023 SLC7A5P2-201ENST00000553010 536 ntBASIC19.48■□□□□ 0.71
RPL3P39023 AC243732.1-201ENST00000612648 864 ntBASIC19.48■□□□□ 0.71
RPL3P39023 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
RPL3P39023 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPL3P39023 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPL3P39023 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
RPL3P39023 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPL3P39023 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPL3P39023 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPL3P39023 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.48■□□□□ 0.71
RPL3P39023 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPL3P39023 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RPL3P39023 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPL3P39023 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPL3P39023 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.47■□□□□ 0.71
RPL3P39023 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RPL3P39023 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPL3P39023 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RPL3P39023 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPL3P39023 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.47■□□□□ 0.71
RPL3P39023 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.47■□□□□ 0.71
RPL3P39023 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.47■□□□□ 0.71
RPL3P39023 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.47■□□□□ 0.71
RPL3P39023 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.47■□□□□ 0.71
RPL3P39023 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.47■□□□□ 0.71
RPL3P39023 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPL3P39023 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RPL3P39023 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
RPL3P39023 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPL3P39023 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RPL3P39023 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.47■□□□□ 0.71
RPL3P39023 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
RPL3P39023 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
RPL3P39023 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPL3P39023 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPL3P39023 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPL3P39023 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPL3P39023 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPL3P39023 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPL3P39023 KRT19P1-201ENST00000405746 1186 ntBASIC19.46■□□□□ 0.71
RPL3P39023 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.46■□□□□ 0.71
RPL3P39023 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RPL3P39023 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPL3P39023 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPL3P39023 AC092667.1-201ENST00000434301 2586 ntBASIC19.46■□□□□ 0.71
RPL3P39023 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPL3P39023 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
RPL3P39023 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPL3P39023 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.46■□□□□ 0.71
RPL3P39023 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RPL3P39023 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPL3P39023 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
RPL3P39023 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
RPL3P39023 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPL3P39023 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPL3P39023 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RPL3P39023 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPL3P39023 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.45■□□□□ 0.7
RPL3P39023 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms