Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP8P22894 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
MMP8P22894 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.68■■□□□ 1.06
MMP8P22894 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP8P22894 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP8P22894 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MMP8P22894 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.68■■□□□ 1.06
MMP8P22894 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP8P22894 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.68■■□□□ 1.06
MMP8P22894 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
MMP8P22894 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
MMP8P22894 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
MMP8P22894 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MMP8P22894 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.68■■□□□ 1.06
MMP8P22894 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
MMP8P22894 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.68■■□□□ 1.06
MMP8P22894 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MMP8P22894 AC092667.1-201ENST00000434301 2586 ntBASIC21.68■■□□□ 1.06
MMP8P22894 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.67■■□□□ 1.06
MMP8P22894 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.67■■□□□ 1.06
MMP8P22894 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MMP8P22894 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MMP8P22894 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
MMP8P22894 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
MMP8P22894 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MMP8P22894 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.67■■□□□ 1.06
MMP8P22894 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MMP8P22894 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
MMP8P22894 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
MMP8P22894 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MMP8P22894 AC016769.1-201ENST00000409132 1010 ntBASIC21.67■■□□□ 1.06
MMP8P22894 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.67■■□□□ 1.06
MMP8P22894 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.67■■□□□ 1.06
MMP8P22894 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
MMP8P22894 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
MMP8P22894 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP8P22894 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MMP8P22894 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
MMP8P22894 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP8P22894 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP8P22894 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.66■■□□□ 1.06
MMP8P22894 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.66■■□□□ 1.06
MMP8P22894 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
MMP8P22894 AC007322.4-201ENST00000509611 723 ntBASIC21.66■■□□□ 1.06
MMP8P22894 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.66■■□□□ 1.06
MMP8P22894 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
MMP8P22894 MIR2861-201ENST00000636310 90 ntBASIC21.66■■□□□ 1.06
MMP8P22894 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MMP8P22894 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
MMP8P22894 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MMP8P22894 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
MMP8P22894 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MMP8P22894 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP8P22894 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP8P22894 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.65■■□□□ 1.06
MMP8P22894 PKD1P6-201ENST00000343738 4769 ntBASIC21.65■■□□□ 1.06
MMP8P22894 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP8P22894 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP8P22894 CDV3P1-201ENST00000471403 739 ntBASIC21.65■■□□□ 1.06
MMP8P22894 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
MMP8P22894 AC013268.1-206ENST00000638368 961 ntBASIC21.65■■□□□ 1.06
MMP8P22894 AC112229.1-201ENST00000639295 961 ntBASIC21.65■■□□□ 1.06
MMP8P22894 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP8P22894 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
MMP8P22894 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.65■■□□□ 1.06
MMP8P22894 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MMP8P22894 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MMP8P22894 AC020907.5-201ENST00000624372 1936 ntBASIC21.65■■□□□ 1.06
MMP8P22894 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
MMP8P22894 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
MMP8P22894 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MMP8P22894 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MMP8P22894 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.64■■□□□ 1.05
MMP8P22894 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
MMP8P22894 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
MMP8P22894 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MMP8P22894 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
MMP8P22894 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
MMP8P22894 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.64■■□□□ 1.05
MMP8P22894 DUX4L16-201ENST00000555130 1264 ntBASIC21.64■■□□□ 1.05
MMP8P22894 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.64■■□□□ 1.05
MMP8P22894 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.64■■□□□ 1.05
MMP8P22894 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.64■■□□□ 1.05
MMP8P22894 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
MMP8P22894 AL591742.1-201ENST00000604433 565 ntBASIC21.64■■□□□ 1.05
MMP8P22894 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MMP8P22894 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
MMP8P22894 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MMP8P22894 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
MMP8P22894 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.64■■□□□ 1.05
MMP8P22894 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MMP8P22894 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MMP8P22894 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP8P22894 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP8P22894 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP8P22894 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MMP8P22894 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP8P22894 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP8P22894 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
MMP8P22894 CNN2P6-201ENST00000439038 900 ntBASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms