Protein–RNA interactions for Protein: P11802

CDK4, Cyclin-dependent kinase 4, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4P11802 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK4P11802 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDK4P11802 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK4P11802 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDK4P11802 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK4P11802 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.36■□□□□ 0.85
CDK4P11802 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK4P11802 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK4P11802 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.36■□□□□ 0.85
CDK4P11802 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK4P11802 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK4P11802 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK4P11802 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDK4P11802 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK4P11802 RBM17P2-201ENST00000616397 1405 ntBASIC20.36■□□□□ 0.85
CDK4P11802 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDK4P11802 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDK4P11802 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK4P11802 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK4P11802 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK4P11802 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK4P11802 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.35■□□□□ 0.85
CDK4P11802 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK4P11802 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.35■□□□□ 0.85
CDK4P11802 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDK4P11802 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CDK4P11802 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.35■□□□□ 0.85
CDK4P11802 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.35■□□□□ 0.85
CDK4P11802 UBE2SP1-201ENST00000450587 669 ntBASIC20.35■□□□□ 0.85
CDK4P11802 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDK4P11802 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CDK4P11802 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.35■□□□□ 0.85
CDK4P11802 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CDK4P11802 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK4P11802 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
CDK4P11802 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDK4P11802 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.35■□□□□ 0.85
CDK4P11802 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK4P11802 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.34■□□□□ 0.85
CDK4P11802 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CDK4P11802 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.34■□□□□ 0.85
CDK4P11802 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.34■□□□□ 0.85
CDK4P11802 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.34■□□□□ 0.85
CDK4P11802 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDK4P11802 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CDK4P11802 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.34■□□□□ 0.85
CDK4P11802 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.34■□□□□ 0.85
CDK4P11802 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDK4P11802 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.34■□□□□ 0.85
CDK4P11802 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.34■□□□□ 0.85
CDK4P11802 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CDK4P11802 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK4P11802 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDK4P11802 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDK4P11802 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDK4P11802 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CDK4P11802 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDK4P11802 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDK4P11802 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
CDK4P11802 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.33■□□□□ 0.85
CDK4P11802 LSM12P1-201ENST00000411836 588 ntBASIC20.33■□□□□ 0.85
CDK4P11802 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDK4P11802 AP003097.1-201ENST00000530657 1135 ntBASIC20.33■□□□□ 0.85
CDK4P11802 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDK4P11802 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDK4P11802 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDK4P11802 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.33■□□□□ 0.84
CDK4P11802 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CDK4P11802 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDK4P11802 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK4P11802 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK4P11802 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK4P11802 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.32■□□□□ 0.84
CDK4P11802 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK4P11802 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK4P11802 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK4P11802 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.32■□□□□ 0.84
CDK4P11802 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.32■□□□□ 0.84
CDK4P11802 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.32■□□□□ 0.84
CDK4P11802 UNC93B4-201ENST00000505679 747 ntBASIC20.32■□□□□ 0.84
CDK4P11802 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CDK4P11802 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CDK4P11802 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDK4P11802 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK4P11802 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDK4P11802 AC005229.4-201ENST00000610085 2198 ntBASIC20.32■□□□□ 0.84
CDK4P11802 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK4P11802 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK4P11802 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CDK4P11802 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDK4P11802 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK4P11802 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CDK4P11802 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK4P11802 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK4P11802 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK4P11802 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK4P11802 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CDK4P11802 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CDK4P11802 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDK4P11802 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms