Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TCRAP04437 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.63■□□□□ 0.09
TCRAP04437 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TCRAP04437 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.63■□□□□ 0.09
TCRAP04437 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TCRAP04437 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TCRAP04437 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
TCRAP04437 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TCRAP04437 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.63■□□□□ 0.09
TCRAP04437 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TCRAP04437 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.63■□□□□ 0.09
TCRAP04437 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.63■□□□□ 0.09
TCRAP04437 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.63■□□□□ 0.09
TCRAP04437 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC15.63■□□□□ 0.09
TCRAP04437 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.63■□□□□ 0.09
TCRAP04437 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRAP04437 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TCRAP04437 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TCRAP04437 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TCRAP04437 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
TCRAP04437 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRAP04437 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TCRAP04437 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRAP04437 AC055733.4-201ENST00000638462 1354 ntBASIC15.62■□□□□ 0.09
TCRAP04437 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TCRAP04437 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.62■□□□□ 0.09
TCRAP04437 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.62■□□□□ 0.09
TCRAP04437 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TCRAP04437 SMG8-203ENST00000578922 2178 ntBASIC15.62■□□□□ 0.09
TCRAP04437 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.62■□□□□ 0.09
TCRAP04437 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TCRAP04437 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TCRAP04437 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.62■□□□□ 0.09
TCRAP04437 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.62■□□□□ 0.09
TCRAP04437 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.62■□□□□ 0.09
TCRAP04437 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRAP04437 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRAP04437 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TCRAP04437 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.62■□□□□ 0.09
TCRAP04437 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRAP04437 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TCRAP04437 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRAP04437 AC087289.5-201ENST00000586076 3175 ntBASIC15.61■□□□□ 0.09
TCRAP04437 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRAP04437 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRAP04437 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
TCRAP04437 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TCRAP04437 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TCRAP04437 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRAP04437 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRAP04437 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRAP04437 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.61■□□□□ 0.09
TCRAP04437 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC15.61■□□□□ 0.09
TCRAP04437 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.61■□□□□ 0.09
TCRAP04437 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.61■□□□□ 0.09
TCRAP04437 GRAMD4P7-201ENST00000578182 1232 ntBASIC15.61■□□□□ 0.09
TCRAP04437 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TCRAP04437 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.61■□□□□ 0.09
TCRAP04437 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRAP04437 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TCRAP04437 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TCRAP04437 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TCRAP04437 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TCRAP04437 TCF3P1-201ENST00000423021 1937 ntBASIC15.6■□□□□ 0.09
TCRAP04437 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TCRAP04437 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TCRAP04437 AC092720.2-201ENST00000602388 1665 ntBASIC15.6■□□□□ 0.09
TCRAP04437 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TCRAP04437 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TCRAP04437 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TCRAP04437 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TCRAP04437 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
TCRAP04437 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TCRAP04437 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
TCRAP04437 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TCRAP04437 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TCRAP04437 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TCRAP04437 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.6■□□□□ 0.09
TCRAP04437 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.6■□□□□ 0.09
TCRAP04437 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC15.6■□□□□ 0.09
TCRAP04437 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TCRAP04437 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TCRAP04437 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TCRAP04437 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TCRAP04437 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TCRAP04437 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TCRAP04437 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.6■□□□□ 0.09
TCRAP04437 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TCRAP04437 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.6■□□□□ 0.09
TCRAP04437 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TCRAP04437 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TCRAP04437 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TCRAP04437 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.59■□□□□ 0.09
TCRAP04437 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TCRAP04437 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.59■□□□□ 0.09
TCRAP04437 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.59■□□□□ 0.09
TCRAP04437 AC133561.4-201ENST00000566112 224 ntBASIC15.59■□□□□ 0.09
TCRAP04437 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.59■□□□□ 0.09
TCRAP04437 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC15.59■□□□□ 0.09
TCRAP04437 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms