Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.28■□□□□ 0.36
CD74P04233 AL138724.1-201ENST00000606771 1088 ntBASIC17.28■□□□□ 0.36
CD74P04233 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.28■□□□□ 0.36
CD74P04233 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD74P04233 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.28■□□□□ 0.36
CD74P04233 AL158211.5-201ENST00000623583 2518 ntBASIC17.28■□□□□ 0.36
CD74P04233 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD74P04233 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.28■□□□□ 0.36
CD74P04233 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.28■□□□□ 0.36
CD74P04233 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD74P04233 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.28■□□□□ 0.36
CD74P04233 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD74P04233 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD74P04233 SYT6-210ENST00000641643 1587 ntBASIC17.28■□□□□ 0.36
CD74P04233 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD74P04233 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.27■□□□□ 0.36
CD74P04233 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.27■□□□□ 0.36
CD74P04233 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CD74P04233 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CD74P04233 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD74P04233 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD74P04233 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD74P04233 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD74P04233 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.27■□□□□ 0.36
CD74P04233 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.27■□□□□ 0.36
CD74P04233 SLC47A1P1-202ENST00000449666 945 ntBASIC17.27■□□□□ 0.36
CD74P04233 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.27■□□□□ 0.36
CD74P04233 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD74P04233 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD74P04233 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CD74P04233 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CD74P04233 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD74P04233 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD74P04233 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD74P04233 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.27■□□□□ 0.35
CD74P04233 AC055733.4-201ENST00000638462 1354 ntBASIC17.27■□□□□ 0.35
CD74P04233 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CD74P04233 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CD74P04233 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CD74P04233 TNXA-203ENST00000507684 2038 ntBASIC17.26■□□□□ 0.35
CD74P04233 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.26■□□□□ 0.35
CD74P04233 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD74P04233 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.26■□□□□ 0.35
CD74P04233 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.26■□□□□ 0.35
CD74P04233 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.26■□□□□ 0.35
CD74P04233 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.26■□□□□ 0.35
CD74P04233 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CD74P04233 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.26■□□□□ 0.35
CD74P04233 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD74P04233 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.26■□□□□ 0.35
CD74P04233 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.26■□□□□ 0.35
CD74P04233 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CD74P04233 SRD5A1P1-201ENST00000442297 786 ntBASIC17.26■□□□□ 0.35
CD74P04233 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.26■□□□□ 0.35
CD74P04233 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD74P04233 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD74P04233 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD74P04233 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.26■□□□□ 0.35
CD74P04233 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.26■□□□□ 0.35
CD74P04233 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CD74P04233 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CD74P04233 AP000974.1-201ENST00000623909 2387 ntBASIC17.25■□□□□ 0.35
CD74P04233 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD74P04233 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.25■□□□□ 0.35
CD74P04233 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.25■□□□□ 0.35
CD74P04233 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD74P04233 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD74P04233 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD74P04233 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD74P04233 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
CD74P04233 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.25■□□□□ 0.35
CD74P04233 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CD74P04233 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CD74P04233 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CD74P04233 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CD74P04233 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD74P04233 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CD74P04233 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.25■□□□□ 0.35
CD74P04233 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.25■□□□□ 0.35
CD74P04233 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD74P04233 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD74P04233 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD74P04233 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD74P04233 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CD74P04233 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD74P04233 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD74P04233 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD74P04233 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD74P04233 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD74P04233 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD74P04233 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD74P04233 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD74P04233 AC009237.3-201ENST00000393279 1427 ntBASIC17.24■□□□□ 0.35
CD74P04233 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.24■□□□□ 0.35
CD74P04233 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CD74P04233 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CD74P04233 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.24■□□□□ 0.35
CD74P04233 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.24■□□□□ 0.35
CD74P04233 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.24■□□□□ 0.35
CD74P04233 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms