Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV3P03979 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV3P03979 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
TRGV3P03979 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV3P03979 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRGV3P03979 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.17■□□□□ 0.18
TRGV3P03979 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV3P03979 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.16■□□□□ 0.18
TRGV3P03979 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.16■□□□□ 0.18
TRGV3P03979 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV3P03979 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.16■□□□□ 0.18
TRGV3P03979 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV3P03979 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV3P03979 AC007322.1-201ENST00000426983 750 ntBASIC16.16■□□□□ 0.18
TRGV3P03979 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.16■□□□□ 0.18
TRGV3P03979 DUX4L16-201ENST00000555130 1264 ntBASIC16.16■□□□□ 0.18
TRGV3P03979 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.16■□□□□ 0.18
TRGV3P03979 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV3P03979 AC231657.2-201ENST00000624556 255 ntBASIC16.16■□□□□ 0.18
TRGV3P03979 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.16■□□□□ 0.18
TRGV3P03979 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.16■□□□□ 0.18
TRGV3P03979 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
TRGV3P03979 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV3P03979 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRGV3P03979 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV3P03979 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.15■□□□□ 0.18
TRGV3P03979 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.15■□□□□ 0.18
TRGV3P03979 CDV3P1-201ENST00000471403 739 ntBASIC16.15■□□□□ 0.18
TRGV3P03979 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.15■□□□□ 0.18
TRGV3P03979 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRGV3P03979 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV3P03979 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.15■□□□□ 0.18
TRGV3P03979 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
TRGV3P03979 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRGV3P03979 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
TRGV3P03979 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV3P03979 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV3P03979 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV3P03979 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.15■□□□□ 0.18
TRGV3P03979 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV3P03979 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV3P03979 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRGV3P03979 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.15■□□□□ 0.18
TRGV3P03979 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRGV3P03979 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV3P03979 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRGV3P03979 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV3P03979 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV3P03979 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.14■□□□□ 0.17
TRGV3P03979 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV3P03979 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV3P03979 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.14■□□□□ 0.17
TRGV3P03979 AC091799.1-201ENST00000422823 811 ntBASIC16.14■□□□□ 0.17
TRGV3P03979 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.14■□□□□ 0.17
TRGV3P03979 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV3P03979 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.14■□□□□ 0.17
TRGV3P03979 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.14■□□□□ 0.17
TRGV3P03979 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.14■□□□□ 0.17
TRGV3P03979 AL591742.1-201ENST00000604433 565 ntBASIC16.14■□□□□ 0.17
TRGV3P03979 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV3P03979 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV3P03979 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
TRGV3P03979 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV3P03979 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV3P03979 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV3P03979 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.14■□□□□ 0.17
TRGV3P03979 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.14■□□□□ 0.17
TRGV3P03979 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV3P03979 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV3P03979 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRGV3P03979 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.13■□□□□ 0.17
TRGV3P03979 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV3P03979 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
TRGV3P03979 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.13■□□□□ 0.17
TRGV3P03979 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV3P03979 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.13■□□□□ 0.17
TRGV3P03979 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.13■□□□□ 0.17
TRGV3P03979 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV3P03979 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV3P03979 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRGV3P03979 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV3P03979 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV3P03979 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.13■□□□□ 0.17
TRGV3P03979 AC073111.5-205ENST00000641717 521 ntBASIC16.13■□□□□ 0.17
TRGV3P03979 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV3P03979 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.13■□□□□ 0.17
TRGV3P03979 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV3P03979 AC121338.2-201ENST00000622535 1744 ntBASIC16.13■□□□□ 0.17
TRGV3P03979 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV3P03979 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV3P03979 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRGV3P03979 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.13■□□□□ 0.17
TRGV3P03979 AC116050.2-201ENST00000612102 1779 ntBASIC16.13■□□□□ 0.17
TRGV3P03979 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.13■□□□□ 0.17
TRGV3P03979 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.12■□□□□ 0.17
TRGV3P03979 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV3P03979 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV3P03979 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV3P03979 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRGV3P03979 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms