Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC31.24■■■□□ 2.59
RAPGEF3O95398 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC31.24■■■□□ 2.59
RAPGEF3O95398 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
RAPGEF3O95398 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
RAPGEF3O95398 HTR7P1-201ENST00000538670 1336 ntBASIC31.24■■■□□ 2.59
RAPGEF3O95398 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
RAPGEF3O95398 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
RAPGEF3O95398 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
RAPGEF3O95398 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
RAPGEF3O95398 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
RAPGEF3O95398 TERF1P1-201ENST00000311003 1181 ntBASIC31.23■■■□□ 2.59
RAPGEF3O95398 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
RAPGEF3O95398 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC31.23■■■□□ 2.59
RAPGEF3O95398 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC31.23■■■□□ 2.59
RAPGEF3O95398 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
RAPGEF3O95398 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC31.23■■■□□ 2.59
RAPGEF3O95398 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC31.23■■■□□ 2.59
RAPGEF3O95398 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC31.23■■■□□ 2.59
RAPGEF3O95398 USF2-205ENST00000594064 1179 ntTSL 2 BASIC31.23■■■□□ 2.59
RAPGEF3O95398 AC026471.6-201ENST00000622954 1905 ntBASIC31.23■■■□□ 2.59
RAPGEF3O95398 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
RAPGEF3O95398 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
RAPGEF3O95398 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC31.22■■■□□ 2.59
RAPGEF3O95398 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RAPGEF3O95398 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC31.22■■■□□ 2.59
RAPGEF3O95398 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC31.22■■■□□ 2.59
RAPGEF3O95398 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC31.22■■■□□ 2.59
RAPGEF3O95398 AP000525.1-201ENST00000608286 694 ntBASIC31.22■■■□□ 2.59
RAPGEF3O95398 MOK-233ENST00000524214 1539 ntTSL 2 BASIC31.22■■■□□ 2.59
RAPGEF3O95398 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC31.22■■■□□ 2.59
RAPGEF3O95398 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
RAPGEF3O95398 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RAPGEF3O95398 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RAPGEF3O95398 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC31.22■■■□□ 2.59
RAPGEF3O95398 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
RAPGEF3O95398 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RAPGEF3O95398 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RAPGEF3O95398 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC31.21■■■□□ 2.59
RAPGEF3O95398 CFL2-205ENST00000555765 632 ntTSL 2 BASIC31.21■■■□□ 2.59
RAPGEF3O95398 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC31.21■■■□□ 2.59
RAPGEF3O95398 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC31.21■■■□□ 2.59
RAPGEF3O95398 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RAPGEF3O95398 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
RAPGEF3O95398 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RAPGEF3O95398 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RAPGEF3O95398 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC31.21■■■□□ 2.59
RAPGEF3O95398 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
RAPGEF3O95398 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
RAPGEF3O95398 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
RAPGEF3O95398 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
RAPGEF3O95398 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC31.2■■■□□ 2.59
RAPGEF3O95398 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC31.2■■■□□ 2.59
RAPGEF3O95398 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
RAPGEF3O95398 SRI-203ENST00000419179 1307 ntTSL 2 BASIC31.2■■■□□ 2.58
RAPGEF3O95398 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
RAPGEF3O95398 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC31.2■■■□□ 2.58
RAPGEF3O95398 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
RAPGEF3O95398 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
RAPGEF3O95398 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
RAPGEF3O95398 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC31.19■■■□□ 2.58
RAPGEF3O95398 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC31.19■■■□□ 2.58
RAPGEF3O95398 AC104076.2-201ENST00000448912 469 ntBASIC31.19■■■□□ 2.58
RAPGEF3O95398 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
RAPGEF3O95398 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
RAPGEF3O95398 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF3O95398 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF3O95398 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF3O95398 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF3O95398 DUX4L26-201ENST00000489078 1255 ntBASIC31.18■■■□□ 2.58
RAPGEF3O95398 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
RAPGEF3O95398 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF3O95398 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC31.18■■■□□ 2.58
RAPGEF3O95398 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC31.18■■■□□ 2.58
RAPGEF3O95398 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
RAPGEF3O95398 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC31.18■■■□□ 2.58
RAPGEF3O95398 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC31.18■■■□□ 2.58
RAPGEF3O95398 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
RAPGEF3O95398 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF3O95398 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF3O95398 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF3O95398 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF3O95398 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF3O95398 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF3O95398 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF3O95398 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF3O95398 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
RAPGEF3O95398 LINC01568-207ENST00000641790 1380 ntBASIC31.17■■■□□ 2.58
RAPGEF3O95398 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RAPGEF3O95398 GCA-201ENST00000233612 1694 ntTSL 2 BASIC31.17■■■□□ 2.58
RAPGEF3O95398 RER1-204ENST00000378518 522 ntTSL 3 BASIC31.17■■■□□ 2.58
RAPGEF3O95398 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
RAPGEF3O95398 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
RAPGEF3O95398 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
RAPGEF3O95398 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
RAPGEF3O95398 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
RAPGEF3O95398 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RAPGEF3O95398 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
RAPGEF3O95398 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
RAPGEF3O95398 CYP2D8P-201ENST00000433633 1490 ntBASIC31.16■■■□□ 2.58
RAPGEF3O95398 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC31.16■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms