Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RTN3O95197 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.68■■□□□ 1.06
RTN3O95197 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.68■■□□□ 1.06
RTN3O95197 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.68■■□□□ 1.06
RTN3O95197 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.68■■□□□ 1.06
RTN3O95197 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTN3O95197 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RTN3O95197 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTN3O95197 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTN3O95197 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTN3O95197 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.67■■□□□ 1.06
RTN3O95197 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.67■■□□□ 1.06
RTN3O95197 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTN3O95197 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTN3O95197 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RTN3O95197 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RTN3O95197 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTN3O95197 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTN3O95197 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTN3O95197 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.67■■□□□ 1.06
RTN3O95197 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.67■■□□□ 1.06
RTN3O95197 CYP2T3P-201ENST00000601990 817 ntBASIC21.67■■□□□ 1.06
RTN3O95197 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.67■■□□□ 1.06
RTN3O95197 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RTN3O95197 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.66■■□□□ 1.06
RTN3O95197 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTN3O95197 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTN3O95197 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RTN3O95197 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.66■■□□□ 1.06
RTN3O95197 LSM12P1-201ENST00000411836 588 ntBASIC21.66■■□□□ 1.06
RTN3O95197 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
RTN3O95197 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.66■■□□□ 1.06
RTN3O95197 KRT18P6-201ENST00000555540 1265 ntBASIC21.66■■□□□ 1.06
RTN3O95197 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.66■■□□□ 1.06
RTN3O95197 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.66■■□□□ 1.06
RTN3O95197 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.66■■□□□ 1.06
RTN3O95197 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTN3O95197 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RTN3O95197 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RTN3O95197 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.66■■□□□ 1.06
RTN3O95197 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTN3O95197 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RTN3O95197 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RTN3O95197 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.66■■□□□ 1.06
RTN3O95197 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTN3O95197 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN3O95197 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RTN3O95197 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RTN3O95197 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN3O95197 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RTN3O95197 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.65■■□□□ 1.06
RTN3O95197 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RTN3O95197 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN3O95197 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RTN3O95197 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.65■■□□□ 1.06
RTN3O95197 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.65■■□□□ 1.06
RTN3O95197 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RTN3O95197 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN3O95197 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RTN3O95197 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN3O95197 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
RTN3O95197 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RTN3O95197 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RTN3O95197 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
RTN3O95197 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.64■■□□□ 1.06
RTN3O95197 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTN3O95197 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.64■■□□□ 1.05
RTN3O95197 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.64■■□□□ 1.05
RTN3O95197 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTN3O95197 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
RTN3O95197 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.64■■□□□ 1.05
RTN3O95197 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RTN3O95197 AL355472.2-201ENST00000422958 438 ntBASIC21.64■■□□□ 1.05
RTN3O95197 AC097658.1-201ENST00000475555 843 ntBASIC21.64■■□□□ 1.05
RTN3O95197 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.64■■□□□ 1.05
RTN3O95197 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
RTN3O95197 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.64■■□□□ 1.05
RTN3O95197 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTN3O95197 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTN3O95197 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
RTN3O95197 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RTN3O95197 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTN3O95197 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.63■■□□□ 1.05
RTN3O95197 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RTN3O95197 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTN3O95197 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RTN3O95197 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RTN3O95197 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RTN3O95197 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RTN3O95197 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.63■■□□□ 1.05
RTN3O95197 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.63■■□□□ 1.05
RTN3O95197 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTN3O95197 CD99P1-205ENST00000527459 561 ntBASIC21.63■■□□□ 1.05
RTN3O95197 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.63■■□□□ 1.05
RTN3O95197 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RTN3O95197 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.63■■□□□ 1.05
RTN3O95197 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTN3O95197 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RTN3O95197 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTN3O95197 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms