Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SOX30O94993 AC091799.1-201ENST00000422823 811 ntBASIC19.11■□□□□ 0.65
SOX30O94993 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SOX30O94993 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SOX30O94993 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SOX30O94993 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SOX30O94993 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SOX30O94993 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SOX30O94993 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SOX30O94993 AC007225.1-201ENST00000566331 1836 ntBASIC19.11■□□□□ 0.65
SOX30O94993 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SOX30O94993 AC027702.1-201ENST00000563810 1770 ntBASIC19.11■□□□□ 0.65
SOX30O94993 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SOX30O94993 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.11■□□□□ 0.65
SOX30O94993 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.1■□□□□ 0.65
SOX30O94993 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SOX30O94993 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SOX30O94993 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SOX30O94993 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SOX30O94993 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.1■□□□□ 0.65
SOX30O94993 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SOX30O94993 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SOX30O94993 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.1■□□□□ 0.65
SOX30O94993 AC007322.3-201ENST00000426526 701 ntBASIC19.1■□□□□ 0.65
SOX30O94993 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.1■□□□□ 0.65
SOX30O94993 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.1■□□□□ 0.65
SOX30O94993 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.1■□□□□ 0.65
SOX30O94993 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.1■□□□□ 0.65
SOX30O94993 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.1■□□□□ 0.65
SOX30O94993 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SOX30O94993 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SOX30O94993 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.1■□□□□ 0.65
SOX30O94993 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SOX30O94993 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SOX30O94993 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SOX30O94993 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SOX30O94993 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
SOX30O94993 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.09■□□□□ 0.65
SOX30O94993 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SOX30O94993 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.09■□□□□ 0.65
SOX30O94993 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.09■□□□□ 0.65
SOX30O94993 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.09■□□□□ 0.65
SOX30O94993 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.09■□□□□ 0.65
SOX30O94993 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SOX30O94993 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SOX30O94993 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SOX30O94993 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SOX30O94993 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.09■□□□□ 0.65
SOX30O94993 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SOX30O94993 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SOX30O94993 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SOX30O94993 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
SOX30O94993 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.08■□□□□ 0.65
SOX30O94993 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SOX30O94993 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.08■□□□□ 0.64
SOX30O94993 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SOX30O94993 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SOX30O94993 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.08■□□□□ 0.64
SOX30O94993 UBE2DNL-204ENST00000602536 740 ntBASIC19.08■□□□□ 0.64
SOX30O94993 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SOX30O94993 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SOX30O94993 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SOX30O94993 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SOX30O94993 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SOX30O94993 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SOX30O94993 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SOX30O94993 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SOX30O94993 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.07■□□□□ 0.64
SOX30O94993 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.07■□□□□ 0.64
SOX30O94993 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SOX30O94993 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SOX30O94993 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
SOX30O94993 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.07■□□□□ 0.64
SOX30O94993 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SOX30O94993 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
SOX30O94993 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SOX30O94993 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
SOX30O94993 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SOX30O94993 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SOX30O94993 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SOX30O94993 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SOX30O94993 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SOX30O94993 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SOX30O94993 TERF1P5-201ENST00000477545 1207 ntBASIC19.07■□□□□ 0.64
SOX30O94993 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SOX30O94993 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.07■□□□□ 0.64
SOX30O94993 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SOX30O94993 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SOX30O94993 AL591742.1-201ENST00000604433 565 ntBASIC19.07■□□□□ 0.64
SOX30O94993 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SOX30O94993 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SOX30O94993 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SOX30O94993 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SOX30O94993 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.07■□□□□ 0.64
SOX30O94993 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.07■□□□□ 0.64
SOX30O94993 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SOX30O94993 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SOX30O94993 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SOX30O94993 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SOX30O94993 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms