Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CLPXO76031 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CLPXO76031 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPXO76031 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPXO76031 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CLPXO76031 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLPXO76031 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLPXO76031 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPXO76031 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPXO76031 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPXO76031 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPXO76031 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLPXO76031 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLPXO76031 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLPXO76031 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLPXO76031 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CLPXO76031 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.61■□□□□ 0.57
CLPXO76031 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLPXO76031 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLPXO76031 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLPXO76031 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLPXO76031 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CLPXO76031 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLPXO76031 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLPXO76031 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLPXO76031 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLPXO76031 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLPXO76031 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
CLPXO76031 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CLPXO76031 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.61■□□□□ 0.57
CLPXO76031 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.61■□□□□ 0.57
CLPXO76031 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.61■□□□□ 0.57
CLPXO76031 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLPXO76031 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLPXO76031 MIR638-201ENST00000385237 100 ntBASIC18.61■□□□□ 0.57
CLPXO76031 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLPXO76031 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.61■□□□□ 0.57
CLPXO76031 AL139246.5-201ENST00000606645 996 ntBASIC18.61■□□□□ 0.57
CLPXO76031 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
CLPXO76031 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.61■□□□□ 0.57
CLPXO76031 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLPXO76031 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLPXO76031 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLPXO76031 AC007225.1-201ENST00000566331 1836 ntBASIC18.6■□□□□ 0.57
CLPXO76031 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
CLPXO76031 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
CLPXO76031 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLPXO76031 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CLPXO76031 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.6■□□□□ 0.57
CLPXO76031 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLPXO76031 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.6■□□□□ 0.57
CLPXO76031 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLPXO76031 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.6■□□□□ 0.57
CLPXO76031 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.6■□□□□ 0.57
CLPXO76031 MIR6724-1-201ENST00000616420 92 ntBASIC18.6■□□□□ 0.57
CLPXO76031 MIR6724-2-201ENST00000616483 92 ntBASIC18.6■□□□□ 0.57
CLPXO76031 MIR6724-4-201ENST00000617390 92 ntBASIC18.6■□□□□ 0.57
CLPXO76031 MIR6724-3-201ENST00000622482 92 ntBASIC18.6■□□□□ 0.57
CLPXO76031 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLPXO76031 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLPXO76031 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.6■□□□□ 0.57
CLPXO76031 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLPXO76031 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.6■□□□□ 0.57
CLPXO76031 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CLPXO76031 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPXO76031 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPXO76031 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.59■□□□□ 0.57
CLPXO76031 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLPXO76031 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CLPXO76031 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPXO76031 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPXO76031 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPXO76031 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CLPXO76031 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPXO76031 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLPXO76031 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPXO76031 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.59■□□□□ 0.57
CLPXO76031 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.59■□□□□ 0.57
CLPXO76031 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.59■□□□□ 0.57
CLPXO76031 AC131281.2-201ENST00000520478 145 ntBASIC18.59■□□□□ 0.57
CLPXO76031 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLPXO76031 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.59■□□□□ 0.57
CLPXO76031 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPXO76031 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CLPXO76031 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CLPXO76031 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPXO76031 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLPXO76031 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLPXO76031 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPXO76031 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CLPXO76031 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CLPXO76031 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLPXO76031 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.59■□□□□ 0.57
CLPXO76031 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.59■□□□□ 0.57
CLPXO76031 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CLPXO76031 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLPXO76031 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CLPXO76031 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLPXO76031 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLPXO76031 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms