Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
UPK3AO75631 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
UPK3AO75631 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
UPK3AO75631 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPK3AO75631 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPK3AO75631 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.42■□□□□ 0.54
UPK3AO75631 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UPK3AO75631 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
UPK3AO75631 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.42■□□□□ 0.54
UPK3AO75631 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
UPK3AO75631 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
UPK3AO75631 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.42■□□□□ 0.54
UPK3AO75631 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
UPK3AO75631 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.42■□□□□ 0.54
UPK3AO75631 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
UPK3AO75631 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
UPK3AO75631 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.42■□□□□ 0.54
UPK3AO75631 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.41■□□□□ 0.54
UPK3AO75631 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
UPK3AO75631 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
UPK3AO75631 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPK3AO75631 MFSD11-216ENST00000590393 1141 ntBASIC18.41■□□□□ 0.54
UPK3AO75631 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPK3AO75631 AC092666.2-201ENST00000613287 246 ntBASIC18.41■□□□□ 0.54
UPK3AO75631 RARRES2P11-201ENST00000635158 484 ntBASIC18.41■□□□□ 0.54
UPK3AO75631 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UPK3AO75631 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UPK3AO75631 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
UPK3AO75631 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.41■□□□□ 0.54
UPK3AO75631 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.41■□□□□ 0.54
UPK3AO75631 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.4■□□□□ 0.54
UPK3AO75631 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.4■□□□□ 0.54
UPK3AO75631 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK3AO75631 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
UPK3AO75631 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UPK3AO75631 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
UPK3AO75631 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK3AO75631 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK3AO75631 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK3AO75631 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
UPK3AO75631 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.4■□□□□ 0.54
UPK3AO75631 AC004911.1-201ENST00000416316 871 ntBASIC18.4■□□□□ 0.54
UPK3AO75631 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.4■□□□□ 0.54
UPK3AO75631 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UPK3AO75631 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UPK3AO75631 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.4■□□□□ 0.54
UPK3AO75631 AC011767.1-201ENST00000617410 1153 ntBASIC18.4■□□□□ 0.54
UPK3AO75631 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.4■□□□□ 0.54
UPK3AO75631 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK3AO75631 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
UPK3AO75631 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
UPK3AO75631 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK3AO75631 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK3AO75631 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
UPK3AO75631 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
UPK3AO75631 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
UPK3AO75631 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
UPK3AO75631 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UPK3AO75631 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.39■□□□□ 0.53
UPK3AO75631 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPK3AO75631 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UPK3AO75631 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.39■□□□□ 0.53
UPK3AO75631 AC245052.3-201ENST00000450182 901 ntBASIC18.39■□□□□ 0.53
UPK3AO75631 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.39■□□□□ 0.53
UPK3AO75631 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
UPK3AO75631 AL137784.2-201ENST00000607332 1000 ntBASIC18.39■□□□□ 0.53
UPK3AO75631 BID-214ENST00000617586 542 ntTSL 5 BASIC18.39■□□□□ 0.53
UPK3AO75631 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPK3AO75631 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.39■□□□□ 0.53
UPK3AO75631 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPK3AO75631 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
UPK3AO75631 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UPK3AO75631 RBM17P2-201ENST00000616397 1405 ntBASIC18.39■□□□□ 0.53
UPK3AO75631 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
UPK3AO75631 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UPK3AO75631 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
UPK3AO75631 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPK3AO75631 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
UPK3AO75631 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.38■□□□□ 0.53
UPK3AO75631 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPK3AO75631 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.38■□□□□ 0.53
UPK3AO75631 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPK3AO75631 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPK3AO75631 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UPK3AO75631 AC010536.3-201ENST00000620306 533 ntBASIC18.38■□□□□ 0.53
UPK3AO75631 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.38■□□□□ 0.53
UPK3AO75631 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UPK3AO75631 AC121338.2-201ENST00000622535 1744 ntBASIC18.37■□□□□ 0.53
UPK3AO75631 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UPK3AO75631 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UPK3AO75631 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPK3AO75631 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.37■□□□□ 0.53
UPK3AO75631 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPK3AO75631 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPK3AO75631 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPK3AO75631 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPK3AO75631 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPK3AO75631 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.37■□□□□ 0.53
UPK3AO75631 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UPK3AO75631 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms