Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN2BO60939 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN2BO60939 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN2BO60939 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN2BO60939 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SCN2BO60939 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.5■□□□□ 0.71
SCN2BO60939 AC105265.2-201ENST00000467189 838 ntBASIC19.5■□□□□ 0.71
SCN2BO60939 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.5■□□□□ 0.71
SCN2BO60939 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN2BO60939 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCN2BO60939 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SCN2BO60939 KRT16P2-201ENST00000414673 1423 ntBASIC19.5■□□□□ 0.71
SCN2BO60939 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCN2BO60939 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN2BO60939 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SCN2BO60939 AL512408.1-201ENST00000569378 2000 ntBASIC19.49■□□□□ 0.71
SCN2BO60939 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SCN2BO60939 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN2BO60939 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SCN2BO60939 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.49■□□□□ 0.71
SCN2BO60939 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.49■□□□□ 0.71
SCN2BO60939 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.49■□□□□ 0.71
SCN2BO60939 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.49■□□□□ 0.71
SCN2BO60939 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN2BO60939 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN2BO60939 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.49■□□□□ 0.71
SCN2BO60939 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCN2BO60939 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
SCN2BO60939 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SCN2BO60939 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.49■□□□□ 0.71
SCN2BO60939 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SCN2BO60939 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SCN2BO60939 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.49■□□□□ 0.71
SCN2BO60939 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.49■□□□□ 0.71
SCN2BO60939 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN2BO60939 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN2BO60939 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.48■□□□□ 0.71
SCN2BO60939 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCN2BO60939 AC010141.2-201ENST00000452426 721 ntBASIC19.48■□□□□ 0.71
SCN2BO60939 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.48■□□□□ 0.71
SCN2BO60939 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
SCN2BO60939 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCN2BO60939 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN2BO60939 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.48■□□□□ 0.71
SCN2BO60939 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN2BO60939 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SCN2BO60939 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN2BO60939 AL121603.2-201ENST00000557373 2117 ntBASIC19.48■□□□□ 0.71
SCN2BO60939 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
SCN2BO60939 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SCN2BO60939 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN2BO60939 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN2BO60939 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.47■□□□□ 0.71
SCN2BO60939 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN2BO60939 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN2BO60939 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.47■□□□□ 0.71
SCN2BO60939 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN2BO60939 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCN2BO60939 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN2BO60939 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCN2BO60939 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SCN2BO60939 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.47■□□□□ 0.71
SCN2BO60939 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SCN2BO60939 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN2BO60939 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN2BO60939 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCN2BO60939 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN2BO60939 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.47■□□□□ 0.71
SCN2BO60939 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN2BO60939 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN2BO60939 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SCN2BO60939 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN2BO60939 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCN2BO60939 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN2BO60939 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN2BO60939 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
SCN2BO60939 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN2BO60939 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN2BO60939 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.46■□□□□ 0.71
SCN2BO60939 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN2BO60939 AL391422.3-201ENST00000603791 2761 ntBASIC19.46■□□□□ 0.71
SCN2BO60939 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SCN2BO60939 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN2BO60939 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN2BO60939 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN2BO60939 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN2BO60939 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN2BO60939 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.46■□□□□ 0.71
SCN2BO60939 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN2BO60939 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.46■□□□□ 0.71
SCN2BO60939 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.46■□□□□ 0.71
SCN2BO60939 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN2BO60939 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN2BO60939 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN2BO60939 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SCN2BO60939 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.46■□□□□ 0.71
SCN2BO60939 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.45■□□□□ 0.7
SCN2BO60939 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.45■□□□□ 0.7
SCN2BO60939 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCN2BO60939 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms