Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
GMDSO60547 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.13■□□□□ 0.49
GMDSO60547 LINC02228-203ENST00000641970 1355 ntBASIC18.13■□□□□ 0.49
GMDSO60547 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GMDSO60547 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GMDSO60547 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GMDSO60547 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.12■□□□□ 0.49
GMDSO60547 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GMDSO60547 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.12■□□□□ 0.49
GMDSO60547 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GMDSO60547 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
GMDSO60547 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GMDSO60547 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.12■□□□□ 0.49
GMDSO60547 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GMDSO60547 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GMDSO60547 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GMDSO60547 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GMDSO60547 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GMDSO60547 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.12■□□□□ 0.49
GMDSO60547 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GMDSO60547 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
GMDSO60547 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GMDSO60547 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.12■□□□□ 0.49
GMDSO60547 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.12■□□□□ 0.49
GMDSO60547 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.12■□□□□ 0.49
GMDSO60547 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GMDSO60547 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.12■□□□□ 0.49
GMDSO60547 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GMDSO60547 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GMDSO60547 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.12■□□□□ 0.49
GMDSO60547 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
GMDSO60547 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.12■□□□□ 0.49
GMDSO60547 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.12■□□□□ 0.49
GMDSO60547 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.12■□□□□ 0.49
GMDSO60547 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
GMDSO60547 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GMDSO60547 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GMDSO60547 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.12■□□□□ 0.49
GMDSO60547 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.12■□□□□ 0.49
GMDSO60547 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GMDSO60547 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.11■□□□□ 0.49
GMDSO60547 AP005212.1-201ENST00000581547 1997 ntBASIC18.11■□□□□ 0.49
GMDSO60547 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.11■□□□□ 0.49
GMDSO60547 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GMDSO60547 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GMDSO60547 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.11■□□□□ 0.49
GMDSO60547 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.11■□□□□ 0.49
GMDSO60547 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.11■□□□□ 0.49
GMDSO60547 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GMDSO60547 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GMDSO60547 YBX1P1-201ENST00000445822 960 ntBASIC18.11■□□□□ 0.49
GMDSO60547 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.11■□□□□ 0.49
GMDSO60547 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.11■□□□□ 0.49
GMDSO60547 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.11■□□□□ 0.49
GMDSO60547 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
GMDSO60547 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.11■□□□□ 0.49
GMDSO60547 AL049796.1-201ENST00000565336 1766 ntBASIC18.11■□□□□ 0.49
GMDSO60547 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
GMDSO60547 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
GMDSO60547 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GMDSO60547 AC073314.1-201ENST00000568729 2216 ntBASIC18.11■□□□□ 0.49
GMDSO60547 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.11■□□□□ 0.49
GMDSO60547 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
GMDSO60547 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.11■□□□□ 0.49
GMDSO60547 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
GMDSO60547 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
GMDSO60547 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GMDSO60547 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
GMDSO60547 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GMDSO60547 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.1■□□□□ 0.49
GMDSO60547 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.1■□□□□ 0.49
GMDSO60547 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GMDSO60547 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.1■□□□□ 0.49
GMDSO60547 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GMDSO60547 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GMDSO60547 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GMDSO60547 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.1■□□□□ 0.49
GMDSO60547 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GMDSO60547 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GMDSO60547 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GMDSO60547 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GMDSO60547 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
GMDSO60547 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.1■□□□□ 0.49
GMDSO60547 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.1■□□□□ 0.49
GMDSO60547 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.1■□□□□ 0.49
GMDSO60547 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
GMDSO60547 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.1■□□□□ 0.49
GMDSO60547 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.1■□□□□ 0.49
GMDSO60547 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
GMDSO60547 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GMDSO60547 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
GMDSO60547 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GMDSO60547 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GMDSO60547 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GMDSO60547 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
GMDSO60547 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
GMDSO60547 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GMDSO60547 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.09■□□□□ 0.49
GMDSO60547 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GMDSO60547 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms