Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.79■□□□□ 0.76
PRICKLE3O43900 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PRICKLE3O43900 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.79■□□□□ 0.76
PRICKLE3O43900 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE3O43900 CLDN5-201ENST00000403084 2357 ntBASIC19.79■□□□□ 0.76
PRICKLE3O43900 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.79■□□□□ 0.76
PRICKLE3O43900 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.79■□□□□ 0.76
PRICKLE3O43900 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE3O43900 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE3O43900 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE3O43900 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE3O43900 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.79■□□□□ 0.76
PRICKLE3O43900 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE3O43900 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PRICKLE3O43900 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.78■□□□□ 0.76
PRICKLE3O43900 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.78■□□□□ 0.76
PRICKLE3O43900 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRICKLE3O43900 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.78■□□□□ 0.76
PRICKLE3O43900 MKRN4P-201ENST00000444706 1521 ntBASIC19.78■□□□□ 0.76
PRICKLE3O43900 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.78■□□□□ 0.76
PRICKLE3O43900 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
PRICKLE3O43900 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
PRICKLE3O43900 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.78■□□□□ 0.76
PRICKLE3O43900 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRICKLE3O43900 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
PRICKLE3O43900 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.78■□□□□ 0.76
PRICKLE3O43900 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRICKLE3O43900 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PRICKLE3O43900 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.78■□□□□ 0.76
PRICKLE3O43900 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PRICKLE3O43900 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.78■□□□□ 0.76
PRICKLE3O43900 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRICKLE3O43900 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRICKLE3O43900 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
PRICKLE3O43900 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRICKLE3O43900 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRICKLE3O43900 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.77■□□□□ 0.76
PRICKLE3O43900 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.77■□□□□ 0.76
PRICKLE3O43900 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRICKLE3O43900 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PRICKLE3O43900 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PRICKLE3O43900 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRICKLE3O43900 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.77■□□□□ 0.76
PRICKLE3O43900 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.77■□□□□ 0.76
PRICKLE3O43900 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.77■□□□□ 0.76
PRICKLE3O43900 CYP2T3P-201ENST00000601990 817 ntBASIC19.77■□□□□ 0.76
PRICKLE3O43900 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.77■□□□□ 0.76
PRICKLE3O43900 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRICKLE3O43900 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
PRICKLE3O43900 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PRICKLE3O43900 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PRICKLE3O43900 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
PRICKLE3O43900 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PRICKLE3O43900 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRICKLE3O43900 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRICKLE3O43900 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.76■□□□□ 0.75
PRICKLE3O43900 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRICKLE3O43900 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRICKLE3O43900 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRICKLE3O43900 MIPEPP3-201ENST00000412105 444 ntBASIC19.76■□□□□ 0.75
PRICKLE3O43900 AL355472.2-201ENST00000422958 438 ntBASIC19.76■□□□□ 0.75
PRICKLE3O43900 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.76■□□□□ 0.75
PRICKLE3O43900 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PRICKLE3O43900 AC142086.2-201ENST00000569753 217 ntBASIC19.76■□□□□ 0.75
PRICKLE3O43900 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRICKLE3O43900 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PRICKLE3O43900 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.76■□□□□ 0.75
PRICKLE3O43900 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PRICKLE3O43900 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
PRICKLE3O43900 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRICKLE3O43900 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.76■□□□□ 0.75
PRICKLE3O43900 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PRICKLE3O43900 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PRICKLE3O43900 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.75■□□□□ 0.75
PRICKLE3O43900 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.75■□□□□ 0.75
PRICKLE3O43900 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PRICKLE3O43900 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRICKLE3O43900 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.75■□□□□ 0.75
PRICKLE3O43900 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRICKLE3O43900 AC006128.1-201ENST00000624704 1661 ntBASIC19.75■□□□□ 0.75
PRICKLE3O43900 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRICKLE3O43900 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.75■□□□□ 0.75
PRICKLE3O43900 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.75■□□□□ 0.75
PRICKLE3O43900 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRICKLE3O43900 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.75■□□□□ 0.75
PRICKLE3O43900 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.75■□□□□ 0.75
PRICKLE3O43900 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.75■□□□□ 0.75
PRICKLE3O43900 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.75■□□□□ 0.75
PRICKLE3O43900 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.75■□□□□ 0.75
PRICKLE3O43900 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
PRICKLE3O43900 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRICKLE3O43900 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PRICKLE3O43900 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.75■□□□□ 0.75
PRICKLE3O43900 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRICKLE3O43900 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PRICKLE3O43900 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRICKLE3O43900 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRICKLE3O43900 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PRICKLE3O43900 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.74■□□□□ 0.75
PRICKLE3O43900 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms