Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC28A2O43868 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC28A2O43868 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SLC28A2O43868 CNN2P6-201ENST00000439038 900 ntBASIC19.76■□□□□ 0.75
SLC28A2O43868 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC28A2O43868 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC28A2O43868 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC28A2O43868 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC28A2O43868 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SLC28A2O43868 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC28A2O43868 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SLC28A2O43868 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC28A2O43868 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC28A2O43868 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC28A2O43868 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SLC28A2O43868 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC28A2O43868 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC28A2O43868 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC28A2O43868 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
SLC28A2O43868 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC28A2O43868 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC28A2O43868 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC28A2O43868 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC28A2O43868 FAM210CP-201ENST00000445714 574 ntBASIC19.75■□□□□ 0.75
SLC28A2O43868 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC28A2O43868 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.75■□□□□ 0.75
SLC28A2O43868 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC28A2O43868 MKRN4P-201ENST00000444706 1521 ntBASIC19.75■□□□□ 0.75
SLC28A2O43868 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC28A2O43868 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC28A2O43868 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC28A2O43868 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC28A2O43868 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC28A2O43868 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC28A2O43868 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC28A2O43868 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC28A2O43868 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC28A2O43868 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC28A2O43868 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC28A2O43868 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SLC28A2O43868 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC28A2O43868 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.74■□□□□ 0.75
SLC28A2O43868 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC28A2O43868 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC28A2O43868 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC28A2O43868 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC28A2O43868 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SLC28A2O43868 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.74■□□□□ 0.75
SLC28A2O43868 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.74■□□□□ 0.75
SLC28A2O43868 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
SLC28A2O43868 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC28A2O43868 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC28A2O43868 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC28A2O43868 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC28A2O43868 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC28A2O43868 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SLC28A2O43868 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.73■□□□□ 0.75
SLC28A2O43868 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
SLC28A2O43868 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.73■□□□□ 0.75
SLC28A2O43868 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SLC28A2O43868 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC28A2O43868 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC28A2O43868 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SLC28A2O43868 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC28A2O43868 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC28A2O43868 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SLC28A2O43868 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC28A2O43868 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC28A2O43868 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
SLC28A2O43868 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC28A2O43868 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC28A2O43868 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC28A2O43868 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC28A2O43868 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC28A2O43868 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC28A2O43868 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC28A2O43868 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC28A2O43868 AC128676.1-201ENST00000454392 318 ntBASIC19.72■□□□□ 0.75
SLC28A2O43868 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC28A2O43868 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SLC28A2O43868 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SLC28A2O43868 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC28A2O43868 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC28A2O43868 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC28A2O43868 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC28A2O43868 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
SLC28A2O43868 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC28A2O43868 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC28A2O43868 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC28A2O43868 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC28A2O43868 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC28A2O43868 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC28A2O43868 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC28A2O43868 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SLC28A2O43868 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC28A2O43868 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC28A2O43868 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.71■□□□□ 0.75
SLC28A2O43868 AC008550.1-201ENST00000511500 884 ntBASIC19.71■□□□□ 0.75
SLC28A2O43868 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC28A2O43868 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms