Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSNA1O43805 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSNA1O43805 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSNA1O43805 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
SSNA1O43805 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSNA1O43805 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSNA1O43805 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.54■□□□□ 0.4
SSNA1O43805 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSNA1O43805 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSNA1O43805 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSNA1O43805 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSNA1O43805 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSNA1O43805 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.54■□□□□ 0.4
SSNA1O43805 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.54■□□□□ 0.4
SSNA1O43805 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SSNA1O43805 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSNA1O43805 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSNA1O43805 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSNA1O43805 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.54■□□□□ 0.4
SSNA1O43805 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSNA1O43805 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SSNA1O43805 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SSNA1O43805 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.54■□□□□ 0.4
SSNA1O43805 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
SSNA1O43805 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SSNA1O43805 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SSNA1O43805 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSNA1O43805 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.53■□□□□ 0.4
SSNA1O43805 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.53■□□□□ 0.4
SSNA1O43805 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SSNA1O43805 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSNA1O43805 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.53■□□□□ 0.4
SSNA1O43805 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.53■□□□□ 0.4
SSNA1O43805 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SSNA1O43805 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSNA1O43805 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSNA1O43805 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SSNA1O43805 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSNA1O43805 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSNA1O43805 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSNA1O43805 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSNA1O43805 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSNA1O43805 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSNA1O43805 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSNA1O43805 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSNA1O43805 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.53■□□□□ 0.4
SSNA1O43805 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSNA1O43805 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSNA1O43805 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.53■□□□□ 0.4
SSNA1O43805 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSNA1O43805 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSNA1O43805 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSNA1O43805 AC121338.2-201ENST00000622535 1744 ntBASIC17.52■□□□□ 0.4
SSNA1O43805 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SSNA1O43805 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSNA1O43805 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSNA1O43805 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.52■□□□□ 0.4
SSNA1O43805 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSNA1O43805 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSNA1O43805 DUX4L9-201ENST00000449051 1259 ntBASIC17.52■□□□□ 0.4
SSNA1O43805 MIR4281-201ENST00000580852 62 ntBASIC17.52■□□□□ 0.4
SSNA1O43805 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SSNA1O43805 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSNA1O43805 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.52■□□□□ 0.4
SSNA1O43805 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
SSNA1O43805 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSNA1O43805 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSNA1O43805 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.52■□□□□ 0.39
SSNA1O43805 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SSNA1O43805 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SSNA1O43805 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SSNA1O43805 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SSNA1O43805 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.52■□□□□ 0.39
SSNA1O43805 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SSNA1O43805 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SSNA1O43805 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SSNA1O43805 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SSNA1O43805 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SSNA1O43805 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.51■□□□□ 0.39
SSNA1O43805 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSNA1O43805 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSNA1O43805 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SSNA1O43805 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSNA1O43805 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSNA1O43805 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSNA1O43805 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSNA1O43805 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SSNA1O43805 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSNA1O43805 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSNA1O43805 RPS2P35-201ENST00000443417 897 ntBASIC17.51■□□□□ 0.39
SSNA1O43805 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SSNA1O43805 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.51■□□□□ 0.39
SSNA1O43805 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSNA1O43805 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSNA1O43805 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.51■□□□□ 0.39
SSNA1O43805 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.51■□□□□ 0.39
SSNA1O43805 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSNA1O43805 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SSNA1O43805 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
SSNA1O43805 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms