Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.1■□□□□ 0.65
NKX2-8O15522 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-8O15522 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-8O15522 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-8O15522 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-8O15522 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-8O15522 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-8O15522 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-8O15522 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-8O15522 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-8O15522 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-8O15522 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-8O15522 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.09■□□□□ 0.65
NKX2-8O15522 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NKX2-8O15522 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.09■□□□□ 0.65
NKX2-8O15522 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.09■□□□□ 0.65
NKX2-8O15522 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.09■□□□□ 0.65
NKX2-8O15522 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.09■□□□□ 0.65
NKX2-8O15522 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
NKX2-8O15522 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NKX2-8O15522 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NKX2-8O15522 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-8O15522 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-8O15522 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NKX2-8O15522 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.09■□□□□ 0.65
NKX2-8O15522 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NKX2-8O15522 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NKX2-8O15522 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.08■□□□□ 0.65
NKX2-8O15522 KRT17P2-201ENST00000300992 1314 ntBASIC19.08■□□□□ 0.65
NKX2-8O15522 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
NKX2-8O15522 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
NKX2-8O15522 AC239809.2-201ENST00000415381 517 ntBASIC19.08■□□□□ 0.64
NKX2-8O15522 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.08■□□□□ 0.64
NKX2-8O15522 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NKX2-8O15522 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.08■□□□□ 0.64
NKX2-8O15522 KRT18P21-201ENST00000515767 1272 ntBASIC19.08■□□□□ 0.64
NKX2-8O15522 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NKX2-8O15522 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.08■□□□□ 0.64
NKX2-8O15522 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NKX2-8O15522 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NKX2-8O15522 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NKX2-8O15522 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NKX2-8O15522 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NKX2-8O15522 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-8O15522 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-8O15522 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-8O15522 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NKX2-8O15522 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-8O15522 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.07■□□□□ 0.64
NKX2-8O15522 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.07■□□□□ 0.64
NKX2-8O15522 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.07■□□□□ 0.64
NKX2-8O15522 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-8O15522 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-8O15522 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-8O15522 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
NKX2-8O15522 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.07■□□□□ 0.64
NKX2-8O15522 AC133681.1-201ENST00000465482 601 ntBASIC19.07■□□□□ 0.64
NKX2-8O15522 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.07■□□□□ 0.64
NKX2-8O15522 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-8O15522 AL049637.2-201ENST00000641778 930 ntBASIC19.07■□□□□ 0.64
NKX2-8O15522 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-8O15522 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NKX2-8O15522 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-8O15522 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.07■□□□□ 0.64
NKX2-8O15522 AC087633.2-202ENST00000565166 1439 ntBASIC19.07■□□□□ 0.64
NKX2-8O15522 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-8O15522 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-8O15522 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX2-8O15522 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.07■□□□□ 0.64
NKX2-8O15522 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
NKX2-8O15522 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NKX2-8O15522 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NKX2-8O15522 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NKX2-8O15522 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.06■□□□□ 0.64
NKX2-8O15522 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.06■□□□□ 0.64
NKX2-8O15522 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NKX2-8O15522 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.06■□□□□ 0.64
NKX2-8O15522 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.06■□□□□ 0.64
NKX2-8O15522 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NKX2-8O15522 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.06■□□□□ 0.64
NKX2-8O15522 AC010331.1-201ENST00000611423 582 ntBASIC19.06■□□□□ 0.64
NKX2-8O15522 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NKX2-8O15522 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NKX2-8O15522 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.06■□□□□ 0.64
NKX2-8O15522 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NKX2-8O15522 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.06■□□□□ 0.64
NKX2-8O15522 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
NKX2-8O15522 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
NKX2-8O15522 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NKX2-8O15522 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.05■□□□□ 0.64
NKX2-8O15522 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
NKX2-8O15522 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.05■□□□□ 0.64
NKX2-8O15522 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.05■□□□□ 0.64
NKX2-8O15522 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.05■□□□□ 0.64
NKX2-8O15522 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NKX2-8O15522 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
NKX2-8O15522 KRASP1-201ENST00000407852 552 ntBASIC19.05■□□□□ 0.64
NKX2-8O15522 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NKX2-8O15522 TSPY15P-201ENST00000457163 923 ntBASIC19.05■□□□□ 0.64
NKX2-8O15522 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms