Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMAD9O15198 AC073130.3-201ENST00000624389 2278 ntBASIC18.63■□□□□ 0.57
SMAD9O15198 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SMAD9O15198 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMAD9O15198 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMAD9O15198 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMAD9O15198 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.63■□□□□ 0.57
SMAD9O15198 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMAD9O15198 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMAD9O15198 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMAD9O15198 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMAD9O15198 AC026310.3-201ENST00000625186 2373 ntBASIC18.62■□□□□ 0.57
SMAD9O15198 AC245052.3-201ENST00000450182 901 ntBASIC18.62■□□□□ 0.57
SMAD9O15198 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.62■□□□□ 0.57
SMAD9O15198 TERF1P5-201ENST00000477545 1207 ntBASIC18.62■□□□□ 0.57
SMAD9O15198 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SMAD9O15198 AC073111.5-205ENST00000641717 521 ntBASIC18.62■□□□□ 0.57
SMAD9O15198 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.62■□□□□ 0.57
SMAD9O15198 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SMAD9O15198 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SMAD9O15198 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SMAD9O15198 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMAD9O15198 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.62■□□□□ 0.57
SMAD9O15198 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMAD9O15198 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMAD9O15198 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SMAD9O15198 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SMAD9O15198 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMAD9O15198 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMAD9O15198 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SMAD9O15198 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMAD9O15198 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.61■□□□□ 0.57
SMAD9O15198 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.61■□□□□ 0.57
SMAD9O15198 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMAD9O15198 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.61■□□□□ 0.57
SMAD9O15198 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.61■□□□□ 0.57
SMAD9O15198 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SMAD9O15198 AC243732.1-201ENST00000612648 864 ntBASIC18.61■□□□□ 0.57
SMAD9O15198 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMAD9O15198 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.61■□□□□ 0.57
SMAD9O15198 AC138932.1-201ENST00000534164 6830 ntBASIC18.61■□□□□ 0.57
SMAD9O15198 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.61■□□□□ 0.57
SMAD9O15198 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMAD9O15198 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SMAD9O15198 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMAD9O15198 FEM1AP4-201ENST00000443167 1987 ntBASIC18.61■□□□□ 0.57
SMAD9O15198 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMAD9O15198 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD9O15198 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SMAD9O15198 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD9O15198 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD9O15198 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
SMAD9O15198 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD9O15198 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD9O15198 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SMAD9O15198 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD9O15198 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD9O15198 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD9O15198 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD9O15198 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.6■□□□□ 0.57
SMAD9O15198 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD9O15198 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD9O15198 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.6■□□□□ 0.57
SMAD9O15198 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.6■□□□□ 0.57
SMAD9O15198 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.6■□□□□ 0.57
SMAD9O15198 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.6■□□□□ 0.57
SMAD9O15198 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SMAD9O15198 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.59■□□□□ 0.57
SMAD9O15198 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMAD9O15198 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMAD9O15198 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.59■□□□□ 0.57
SMAD9O15198 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMAD9O15198 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.59■□□□□ 0.57
SMAD9O15198 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.59■□□□□ 0.57
SMAD9O15198 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SMAD9O15198 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMAD9O15198 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMAD9O15198 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.59■□□□□ 0.57
SMAD9O15198 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.59■□□□□ 0.57
SMAD9O15198 CNN2P6-201ENST00000439038 900 ntBASIC18.59■□□□□ 0.57
SMAD9O15198 CDCA4P2-201ENST00000441182 718 ntBASIC18.59■□□□□ 0.57
SMAD9O15198 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.59■□□□□ 0.57
SMAD9O15198 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.59■□□□□ 0.57
SMAD9O15198 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.59■□□□□ 0.57
SMAD9O15198 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
SMAD9O15198 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SMAD9O15198 AC013268.1-206ENST00000638368 961 ntBASIC18.59■□□□□ 0.57
SMAD9O15198 AC112229.1-201ENST00000639295 961 ntBASIC18.59■□□□□ 0.57
SMAD9O15198 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.59■□□□□ 0.57
SMAD9O15198 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMAD9O15198 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SMAD9O15198 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.59■□□□□ 0.57
SMAD9O15198 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMAD9O15198 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMAD9O15198 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMAD9O15198 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
SMAD9O15198 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SMAD9O15198 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMAD9O15198 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMAD9O15198 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms