Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC006128.1-201ENST00000624704 1661 ntBASIC18.97■□□□□ 0.63
TO15178 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TO15178 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.97■□□□□ 0.63
TO15178 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.97■□□□□ 0.63
TO15178 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.97■□□□□ 0.63
TO15178 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TO15178 AC027702.1-201ENST00000563810 1770 ntBASIC18.96■□□□□ 0.63
TO15178 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TO15178 AL137060.1-201ENST00000618151 2648 ntBASIC18.96■□□□□ 0.63
TO15178 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TO15178 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TO15178 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.96■□□□□ 0.63
TO15178 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.96■□□□□ 0.63
TO15178 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TO15178 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TO15178 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TO15178 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TO15178 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TO15178 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.96■□□□□ 0.63
TO15178 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TO15178 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.95■□□□□ 0.62
TO15178 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TO15178 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TO15178 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TO15178 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TO15178 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TO15178 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TO15178 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TO15178 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.95■□□□□ 0.62
TO15178 AC006970.2-201ENST00000450065 779 ntBASIC18.95■□□□□ 0.62
TO15178 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.95■□□□□ 0.62
TO15178 AC090192.1-201ENST00000517740 490 ntBASIC18.95■□□□□ 0.62
TO15178 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.95■□□□□ 0.62
TO15178 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TO15178 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TO15178 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TO15178 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TO15178 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TO15178 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.95■□□□□ 0.62
TO15178 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.95■□□□□ 0.62
TO15178 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TO15178 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TO15178 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TO15178 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TO15178 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TO15178 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TO15178 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
TO15178 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.94■□□□□ 0.62
TO15178 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.94■□□□□ 0.62
TO15178 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.94■□□□□ 0.62
TO15178 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TO15178 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TO15178 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TO15178 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.94■□□□□ 0.62
TO15178 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TO15178 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.94■□□□□ 0.62
TO15178 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.94■□□□□ 0.62
TO15178 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TO15178 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.94■□□□□ 0.62
TO15178 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.94■□□□□ 0.62
TO15178 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
TO15178 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TO15178 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TO15178 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.94■□□□□ 0.62
TO15178 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TO15178 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.93■□□□□ 0.62
TO15178 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.93■□□□□ 0.62
TO15178 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TO15178 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TO15178 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TO15178 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.93■□□□□ 0.62
TO15178 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TO15178 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TO15178 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.93■□□□□ 0.62
TO15178 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.93■□□□□ 0.62
TO15178 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TO15178 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
TO15178 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TO15178 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TO15178 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TO15178 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TO15178 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.92■□□□□ 0.62
TO15178 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TO15178 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TO15178 CYP21A1P-202ENST00000354927 1481 ntBASIC18.92■□□□□ 0.62
TO15178 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TO15178 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TO15178 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.92■□□□□ 0.62
TO15178 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.92■□□□□ 0.62
TO15178 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TO15178 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.92■□□□□ 0.62
TO15178 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TO15178 NCF1B-203ENST00000435988 1254 ntBASIC18.92■□□□□ 0.62
TO15178 AF201337.1-201ENST00000520239 748 ntBASIC18.92■□□□□ 0.62
TO15178 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.92■□□□□ 0.62
TO15178 AL121832.2-201ENST00000610979 668 ntBASIC18.92■□□□□ 0.62
TO15178 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TO15178 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TO15178 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TO15178 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms