Protein–RNA interactions for Protein: O13563

RPN13, 26S proteasome regulatory subunit RPN13, yeastyeast

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN13O13563 YNL198CYNL198C 303 nt3.07□□□□□ -1.92
RPN13O13563 EGD1YPL037C 474 nt3.07□□□□□ -1.92
RPN13O13563 YPL039WYPL039W 951 nt3.07□□□□□ -1.92
RPN13O13563 YPL142CYPL142C 318 nt3.07□□□□□ -1.92
RPN13O13563 XRN1YGL173C 4587 nt3.07□□□□□ -1.92
RPN13O13563 RSF2YJR127C 4143 nt3.07□□□□□ -1.92
RPN13O13563 YSP2YDR326C 4317 nt3.07□□□□□ -1.92
RPN13O13563 snR80snR80 171 nt3.06□□□□□ -1.92
RPN13O13563 YGL007C-AYGL007C-A 87 nt3.06□□□□□ -1.92
RPN13O13563 SPT16YGL207W 3108 nt3.06□□□□□ -1.92
RPN13O13563 RPS0AYGR214W 759 nt3.06□□□□□ -1.92
RPN13O13563 SMI1YGR229C 1518 nt3.06□□□□□ -1.92
RPN13O13563 RPC10YHR143W-A 213 nt3.06□□□□□ -1.92
RPN13O13563 YHR214W-AYHR214W-A 486 nt3.06□□□□□ -1.92
RPN13O13563 RPS21BYJL136C 264 nt3.06□□□□□ -1.92
RPN13O13563 FAS1YKL182W 6156 nt3.06□□□□□ -1.92
RPN13O13563 YAR068WYAR068W 486 nt3.06□□□□□ -1.92
RPN13O13563 YBL065WYBL065W 345 nt3.06□□□□□ -1.92
RPN13O13563 YPL152W-AYPL152W-A 99 nt3.06□□□□□ -1.92
RPN13O13563 SPO71YDR104C 3738 nt3.06□□□□□ -1.92
RPN13O13563 RPS26BYER131W 360 nt3.05□□□□□ -1.92
RPN13O13563 YJL222W-BYJL222W-B 138 nt3.05□□□□□ -1.92
RPN13O13563 COX19YLL018C-A 297 nt3.05□□□□□ -1.92
RPN13O13563 PGA1YNL158W 597 nt3.05□□□□□ -1.92
RPN13O13563 RPL23AYBL087C 414 nt3.05□□□□□ -1.92
RPN13O13563 BIL1YOR304C-A 231 nt3.05□□□□□ -1.92
RPN13O13563 RPL20BYOR312C 519 nt3.05□□□□□ -1.92
RPN13O13563 SEC6YIL068C 2418 nt3.05□□□□□ -1.92
RPN13O13563 NDT80YHR124W 1884 nt3.05□□□□□ -1.92
RPN13O13563 YKL050CYKL050C 2769 nt3.05□□□□□ -1.92
RPN13O13563 STT4YLR305C 5703 nt3.04□□□□□ -1.92
RPN13O13563 MSH4YFL003C 2637 nt3.04□□□□□ -1.92
RPN13O13563 YGL152CYGL152C 678 nt3.04□□□□□ -1.92
RPN13O13563 tR(ACG)JtR(ACG)J 73 nt3.04□□□□□ -1.92
RPN13O13563 MSL1YIR009W 336 nt3.04□□□□□ -1.92
RPN13O13563 YPL080CYPL080C 327 nt3.04□□□□□ -1.92
RPN13O13563 YPL238CYPL238C 390 nt3.04□□□□□ -1.92
RPN13O13563 REC8YPR007C 2043 nt3.03□□□□□ -1.92
RPN13O13563 ZDS2YML109W 2829 nt3.03□□□□□ -1.92
RPN13O13563 RAD6YGL058W 519 nt3.03□□□□□ -1.92
RPN13O13563 NOP19YGR251W 591 nt3.03□□□□□ -1.92
RPN13O13563 GOT1YMR292W 417 nt3.03□□□□□ -1.92
RPN13O13563 NDD1YOR372C 1665 nt3.03□□□□□ -1.92
RPN13O13563 SRB4YER022W 2064 nt3.03□□□□□ -1.92
RPN13O13563 VIP1YLR410W 3441 nt3.03□□□□□ -1.92
RPN13O13563 CHS2YBR038W 2892 nt3.02□□□□□ -1.93
RPN13O13563 FRQ1YDR373W 573 nt3.02□□□□□ -1.93
RPN13O13563 PAU14YIL176C 363 nt3.02□□□□□ -1.93
RPN13O13563 RPL39YJL189W 156 nt3.02□□□□□ -1.93
RPN13O13563 PAU1YJL223C 363 nt3.02□□□□□ -1.93
RPN13O13563 YKL033W-AYKL033W-A 711 nt3.02□□□□□ -1.93
RPN13O13563 RPL15AYLR029C 615 nt3.02□□□□□ -1.93
RPN13O13563 SNX41YDR425W 1878 nt3.02□□□□□ -1.93
RPN13O13563 CPA2YJR109C 3357 nt3.02□□□□□ -1.93
RPN13O13563 MES1YGR264C 2256 nt3.02□□□□□ -1.93
RPN13O13563 ALY1YKR021W 2748 nt3.01□□□□□ -1.93
RPN13O13563 RPL29YFR032C-A 180 nt3.01□□□□□ -1.93
RPN13O13563 YFR056CYFR056C 369 nt3.01□□□□□ -1.93
RPN13O13563 YHR007C-AYHR007C-A 216 nt3.01□□□□□ -1.93
RPN13O13563 LSM8YJR022W 330 nt3.01□□□□□ -1.93
RPN13O13563 RPB11YOL005C 363 nt3.01□□□□□ -1.93
RPN13O13563 CDH1YGL003C 1701 nt3.01□□□□□ -1.93
RPN13O13563 SYT1YPR095C 3681 nt3.01□□□□□ -1.93
RPN13O13563 DPB11YJL090C 2295 nt3□□□□□ -1.93
RPN13O13563 IMH1YLR309C 2736 nt3□□□□□ -1.93
RPN13O13563 YKL100CYKL100C 1764 nt3□□□□□ -1.93
RPN13O13563 YDR183C-AYDR183C-A 258 nt3□□□□□ -1.93
RPN13O13563 ATP17YDR377W 306 nt3□□□□□ -1.93
RPN13O13563 YER188C-AYER188C-A 300 nt3□□□□□ -1.93
RPN13O13563 BAT1YHR208W 1182 nt3□□□□□ -1.93
RPN13O13563 YIR040CYIR040C 333 nt3□□□□□ -1.93
RPN13O13563 YJR023CYJR023C 402 nt3□□□□□ -1.93
RPN13O13563 JIP3YLR331C 378 nt3□□□□□ -1.93
RPN13O13563 PRE8YML092C 753 nt3□□□□□ -1.93
RPN13O13563 SLM6YBR266C 453 nt3□□□□□ -1.93
RPN13O13563 UBP14YBR058C 2346 nt3□□□□□ -1.93
RPN13O13563 PDR12YPL058C 4536 nt3□□□□□ -1.93
RPN13O13563 FRE8YLR047C 2061 nt2.99□□□□□ -1.93
RPN13O13563 YBP1YBR216C 2025 nt2.99□□□□□ -1.93
RPN13O13563 HMF1YER057C 390 nt2.99□□□□□ -1.93
RPN13O13563 YER107W-AYER107W-A 321 nt2.99□□□□□ -1.93
RPN13O13563 YFL063WYFL063W 456 nt2.99□□□□□ -1.93
RPN13O13563 tM(CAU)Q1tM(CAU)Q1 76 nt2.99□□□□□ -1.93
RPN13O13563 AIM26YKL037W 357 nt2.99□□□□□ -1.93
RPN13O13563 RPS22BYLR367W 393 nt2.99□□□□□ -1.93
RPN13O13563 ENA2YDR039C 3276 nt2.99□□□□□ -1.93
RPN13O13563 ENA1YDR040C 3276 nt2.99□□□□□ -1.93
RPN13O13563 RRM3YHR031C 2172 nt2.99□□□□□ -1.93
RPN13O13563 FUN30YAL019W 3396 nt2.99□□□□□ -1.93
RPN13O13563 FRT2YAL028W 1587 nt2.99□□□□□ -1.93
RPN13O13563 YHR078WYHR078W 1659 nt2.98□□□□□ -1.93
RPN13O13563 YDR089WYDR089W 2610 nt2.98□□□□□ -1.93
RPN13O13563 DYN2YDR424C 279 nt2.98□□□□□ -1.93
RPN13O13563 SMT3YDR510W 306 nt2.98□□□□□ -1.93
RPN13O13563 IRC4YDR540C 540 nt2.98□□□□□ -1.93
RPN13O13563 CYC7YEL039C 342 nt2.98□□□□□ -1.93
RPN13O13563 YER066C-AYER066C-A 501 nt2.98□□□□□ -1.93
RPN13O13563 PXR1YGR280C 816 nt2.98□□□□□ -1.93
RPN13O13563 URM1YIL008W 300 nt2.98□□□□□ -1.93
RPN13O13563 YJL015CYJL015C 285 nt2.98□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 27.1 ms