Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK2O00526 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UPK2O00526 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK2O00526 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.49■□□□□ 0.23
UPK2O00526 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK2O00526 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK2O00526 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.49■□□□□ 0.23
UPK2O00526 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.49■□□□□ 0.23
UPK2O00526 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.49■□□□□ 0.23
UPK2O00526 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK2O00526 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK2O00526 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UPK2O00526 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.49■□□□□ 0.23
UPK2O00526 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK2O00526 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UPK2O00526 DUX4L2-201ENST00000561772 1275 ntBASIC16.49■□□□□ 0.23
UPK2O00526 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.49■□□□□ 0.23
UPK2O00526 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.49■□□□□ 0.23
UPK2O00526 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
UPK2O00526 DUX4L6-201ENST00000626483 1275 ntBASIC16.49■□□□□ 0.23
UPK2O00526 DUX4L1-201ENST00000627662 1275 ntBASIC16.49■□□□□ 0.23
UPK2O00526 DUX4L8-201ENST00000629013 1275 ntBASIC16.49■□□□□ 0.23
UPK2O00526 DUX4L3-201ENST00000630187 1275 ntBASIC16.49■□□□□ 0.23
UPK2O00526 DUX4L7-201ENST00000630678 1275 ntBASIC16.49■□□□□ 0.23
UPK2O00526 DUX4L5-201ENST00000630834 1275 ntBASIC16.49■□□□□ 0.23
UPK2O00526 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK2O00526 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.49■□□□□ 0.23
UPK2O00526 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UPK2O00526 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UPK2O00526 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UPK2O00526 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK2O00526 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
UPK2O00526 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UPK2O00526 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK2O00526 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.48■□□□□ 0.23
UPK2O00526 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UPK2O00526 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK2O00526 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK2O00526 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK2O00526 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.48■□□□□ 0.23
UPK2O00526 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.48■□□□□ 0.23
UPK2O00526 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.48■□□□□ 0.23
UPK2O00526 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK2O00526 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.48■□□□□ 0.23
UPK2O00526 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK2O00526 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.48■□□□□ 0.23
UPK2O00526 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK2O00526 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK2O00526 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK2O00526 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UPK2O00526 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
UPK2O00526 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.48■□□□□ 0.23
UPK2O00526 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK2O00526 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK2O00526 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.47■□□□□ 0.23
UPK2O00526 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
UPK2O00526 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK2O00526 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.47■□□□□ 0.23
UPK2O00526 AL162377.1-201ENST00000618844 1793 ntBASIC16.47■□□□□ 0.23
UPK2O00526 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
UPK2O00526 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK2O00526 AC104187.1-201ENST00000607510 612 ntBASIC16.47■□□□□ 0.23
UPK2O00526 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.47■□□□□ 0.23
UPK2O00526 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.47■□□□□ 0.23
UPK2O00526 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
UPK2O00526 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK2O00526 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UPK2O00526 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
UPK2O00526 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK2O00526 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
UPK2O00526 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UPK2O00526 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK2O00526 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.47■□□□□ 0.23
UPK2O00526 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK2O00526 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.46■□□□□ 0.23
UPK2O00526 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK2O00526 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK2O00526 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.46■□□□□ 0.23
UPK2O00526 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.46■□□□□ 0.23
UPK2O00526 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK2O00526 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK2O00526 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK2O00526 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
UPK2O00526 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UPK2O00526 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UPK2O00526 SLC7A5P2-201ENST00000553010 536 ntBASIC16.46■□□□□ 0.23
UPK2O00526 AP001160.3-201ENST00000601484 763 ntBASIC16.46■□□□□ 0.23
UPK2O00526 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.46■□□□□ 0.23
UPK2O00526 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.46■□□□□ 0.23
UPK2O00526 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.46■□□□□ 0.23
UPK2O00526 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UPK2O00526 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UPK2O00526 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
UPK2O00526 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK2O00526 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.46■□□□□ 0.23
UPK2O00526 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.46■□□□□ 0.23
UPK2O00526 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
UPK2O00526 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
UPK2O00526 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
UPK2O00526 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms