Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTCAO00442 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTCAO00442 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RTCAO00442 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTCAO00442 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.62■□□□□ 0.73
RTCAO00442 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.62■□□□□ 0.73
RTCAO00442 AC116050.2-201ENST00000612102 1779 ntBASIC19.62■□□□□ 0.73
RTCAO00442 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTCAO00442 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.62■□□□□ 0.73
RTCAO00442 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RTCAO00442 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RTCAO00442 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.62■□□□□ 0.73
RTCAO00442 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RTCAO00442 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTCAO00442 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RTCAO00442 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.62■□□□□ 0.73
RTCAO00442 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RTCAO00442 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTCAO00442 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTCAO00442 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTCAO00442 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.61■□□□□ 0.73
RTCAO00442 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTCAO00442 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTCAO00442 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RTCAO00442 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTCAO00442 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTCAO00442 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTCAO00442 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTCAO00442 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTCAO00442 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.61■□□□□ 0.73
RTCAO00442 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.61■□□□□ 0.73
RTCAO00442 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RTCAO00442 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
RTCAO00442 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTCAO00442 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
RTCAO00442 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTCAO00442 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTCAO00442 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTCAO00442 FP700111.2-201ENST00000619190 1892 ntBASIC19.6■□□□□ 0.73
RTCAO00442 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.6■□□□□ 0.73
RTCAO00442 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTCAO00442 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.6■□□□□ 0.73
RTCAO00442 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.6■□□□□ 0.73
RTCAO00442 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RTCAO00442 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTCAO00442 DUX4L16-201ENST00000555130 1264 ntBASIC19.6■□□□□ 0.73
RTCAO00442 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.6■□□□□ 0.73
RTCAO00442 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
RTCAO00442 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTCAO00442 BID-214ENST00000617586 542 ntTSL 5 BASIC19.6■□□□□ 0.73
RTCAO00442 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RTCAO00442 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTCAO00442 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTCAO00442 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.6■□□□□ 0.73
RTCAO00442 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTCAO00442 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTCAO00442 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTCAO00442 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTCAO00442 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTCAO00442 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.6■□□□□ 0.73
RTCAO00442 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RTCAO00442 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTCAO00442 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTCAO00442 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTCAO00442 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTCAO00442 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTCAO00442 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RTCAO00442 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTCAO00442 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTCAO00442 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTCAO00442 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.59■□□□□ 0.73
RTCAO00442 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.59■□□□□ 0.73
RTCAO00442 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.59■□□□□ 0.73
RTCAO00442 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RTCAO00442 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.59■□□□□ 0.73
RTCAO00442 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTCAO00442 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.59■□□□□ 0.73
RTCAO00442 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTCAO00442 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTCAO00442 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTCAO00442 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RTCAO00442 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTCAO00442 AC007225.1-201ENST00000566331 1836 ntBASIC19.58■□□□□ 0.73
RTCAO00442 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
RTCAO00442 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTCAO00442 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTCAO00442 AC004911.1-201ENST00000416316 871 ntBASIC19.58■□□□□ 0.72
RTCAO00442 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.58■□□□□ 0.72
RTCAO00442 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.58■□□□□ 0.72
RTCAO00442 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTCAO00442 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.58■□□□□ 0.72
RTCAO00442 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RTCAO00442 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RTCAO00442 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.58■□□□□ 0.72
RTCAO00442 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RTCAO00442 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RTCAO00442 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.58■□□□□ 0.72
RTCAO00442 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTCAO00442 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.57■□□□□ 0.72
RTCAO00442 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms