Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
O00370 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
O00370 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
O00370 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.93■■□□□ 1.1
O00370 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.93■■□□□ 1.1
O00370 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
O00370 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.93■■□□□ 1.1
O00370 AC231657.2-201ENST00000624556 255 ntBASIC21.93■■□□□ 1.1
O00370 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
O00370 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
O00370 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
O00370 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
O00370 AC011484.1-201ENST00000377652 1995 ntBASIC21.92■■□□□ 1.1
O00370 PLK5-205ENST00000642079 1969 ntBASIC21.92■■□□□ 1.1
O00370 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
O00370 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
O00370 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
O00370 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
O00370 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
O00370 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
O00370 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
O00370 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
O00370 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
O00370 AL591742.1-201ENST00000604433 565 ntBASIC21.92■■□□□ 1.1
O00370 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.92■■□□□ 1.1
O00370 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
O00370 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.92■■□□□ 1.1
O00370 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
O00370 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
O00370 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
O00370 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
O00370 AC121338.2-201ENST00000622535 1744 ntBASIC21.92■■□□□ 1.1
O00370 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
O00370 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
O00370 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
O00370 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.91■■□□□ 1.1
O00370 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.91■■□□□ 1.1
O00370 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
O00370 AC068338.2-201ENST00000563278 1430 ntBASIC21.91■■□□□ 1.1
O00370 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.91■■□□□ 1.1
O00370 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.91■■□□□ 1.1
O00370 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
O00370 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
O00370 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.91■■□□□ 1.1
O00370 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
O00370 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.91■■□□□ 1.1
O00370 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
O00370 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
O00370 AC116050.2-201ENST00000612102 1779 ntBASIC21.91■■□□□ 1.1
O00370 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
O00370 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
O00370 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.91■■□□□ 1.1
O00370 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
O00370 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
O00370 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
O00370 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
O00370 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
O00370 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
O00370 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.9■■□□□ 1.1
O00370 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
O00370 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
O00370 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.9■■□□□ 1.1
O00370 AC007322.1-201ENST00000426983 750 ntBASIC21.9■■□□□ 1.1
O00370 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.9■■□□□ 1.1
O00370 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.9■■□□□ 1.1
O00370 AL162412.1-201ENST00000567129 965 ntBASIC21.9■■□□□ 1.1
O00370 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
O00370 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
O00370 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
O00370 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
O00370 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
O00370 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
O00370 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.9■■□□□ 1.1
O00370 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.89■■□□□ 1.1
O00370 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
O00370 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
O00370 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
O00370 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
O00370 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.89■■□□□ 1.09
O00370 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.89■■□□□ 1.09
O00370 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.89■■□□□ 1.09
O00370 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.89■■□□□ 1.09
O00370 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.89■■□□□ 1.09
O00370 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.89■■□□□ 1.09
O00370 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.89■■□□□ 1.09
O00370 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
O00370 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
O00370 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
O00370 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
O00370 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
O00370 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
O00370 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
O00370 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
O00370 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
O00370 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
O00370 AC092667.1-201ENST00000434301 2586 ntBASIC21.89■■□□□ 1.09
O00370 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
O00370 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
O00370 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.88■■□□□ 1.09
O00370 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms