Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
DDX39AO00148 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
DDX39AO00148 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX39AO00148 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DDX39AO00148 DUSP5P2-201ENST00000426873 1033 ntBASIC23.19■■□□□ 1.3
DDX39AO00148 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.19■■□□□ 1.3
DDX39AO00148 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
DDX39AO00148 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX39AO00148 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX39AO00148 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX39AO00148 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
DDX39AO00148 CYP21A1P-202ENST00000354927 1481 ntBASIC23.18■■□□□ 1.3
DDX39AO00148 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
DDX39AO00148 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
DDX39AO00148 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX39AO00148 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
DDX39AO00148 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DDX39AO00148 MCRIP2P1-201ENST00000394346 511 ntBASIC23.18■■□□□ 1.3
DDX39AO00148 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.18■■□□□ 1.3
DDX39AO00148 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DDX39AO00148 AC073210.2-201ENST00000430369 194 ntBASIC23.18■■□□□ 1.3
DDX39AO00148 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.18■■□□□ 1.3
DDX39AO00148 CD99P1-205ENST00000527459 561 ntBASIC23.18■■□□□ 1.3
DDX39AO00148 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.18■■□□□ 1.3
DDX39AO00148 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.18■■□□□ 1.3
DDX39AO00148 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX39AO00148 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DDX39AO00148 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX39AO00148 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
DDX39AO00148 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX39AO00148 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
DDX39AO00148 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX39AO00148 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
DDX39AO00148 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX39AO00148 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.17■■□□□ 1.3
DDX39AO00148 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
DDX39AO00148 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX39AO00148 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.17■■□□□ 1.3
DDX39AO00148 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.17■■□□□ 1.3
DDX39AO00148 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX39AO00148 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX39AO00148 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.17■■□□□ 1.3
DDX39AO00148 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
DDX39AO00148 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.17■■□□□ 1.3
DDX39AO00148 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX39AO00148 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
DDX39AO00148 AL049796.1-201ENST00000565336 1766 ntBASIC23.17■■□□□ 1.3
DDX39AO00148 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC23.17■■□□□ 1.3
DDX39AO00148 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX39AO00148 AC026310.3-201ENST00000625186 2373 ntBASIC23.16■■□□□ 1.3
DDX39AO00148 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
DDX39AO00148 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.16■■□□□ 1.3
DDX39AO00148 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
DDX39AO00148 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX39AO00148 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.16■■□□□ 1.3
DDX39AO00148 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
DDX39AO00148 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.16■■□□□ 1.3
DDX39AO00148 AC091874.3-201ENST00000512672 1195 ntBASIC23.16■■□□□ 1.3
DDX39AO00148 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.16■■□□□ 1.3
DDX39AO00148 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
DDX39AO00148 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX39AO00148 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.16■■□□□ 1.3
DDX39AO00148 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
DDX39AO00148 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX39AO00148 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
DDX39AO00148 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.15■■□□□ 1.3
DDX39AO00148 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.15■■□□□ 1.3
DDX39AO00148 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
DDX39AO00148 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
DDX39AO00148 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.15■■□□□ 1.3
DDX39AO00148 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.15■■□□□ 1.3
DDX39AO00148 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23.15■■□□□ 1.3
DDX39AO00148 AC083880.1-201ENST00000608266 535 ntBASIC23.15■■□□□ 1.3
DDX39AO00148 AC100791.3-201ENST00000617619 330 ntBASIC23.15■■□□□ 1.3
DDX39AO00148 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
DDX39AO00148 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.15■■□□□ 1.3
DDX39AO00148 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX39AO00148 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.15■■□□□ 1.3
DDX39AO00148 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
DDX39AO00148 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
DDX39AO00148 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX39AO00148 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.14■■□□□ 1.3
DDX39AO00148 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
DDX39AO00148 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
DDX39AO00148 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
DDX39AO00148 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
DDX39AO00148 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
DDX39AO00148 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
DDX39AO00148 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.14■■□□□ 1.29
DDX39AO00148 RNA5SP413-201ENST00000516373 109 ntBASIC23.14■■□□□ 1.29
DDX39AO00148 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.14■■□□□ 1.29
DDX39AO00148 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.14■■□□□ 1.29
DDX39AO00148 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.14■■□□□ 1.29
DDX39AO00148 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.14■■□□□ 1.29
DDX39AO00148 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.14■■□□□ 1.29
DDX39AO00148 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX39AO00148 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX39AO00148 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX39AO00148 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.13■■□□□ 1.29
DDX39AO00148 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms