Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.57■□□□□ 0.24
SRRM4A7MD48 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.56■□□□□ 0.24
SRRM4A7MD48 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SRRM4A7MD48 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SRRM4A7MD48 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SRRM4A7MD48 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SRRM4A7MD48 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.56■□□□□ 0.24
SRRM4A7MD48 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SRRM4A7MD48 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SRRM4A7MD48 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.56■□□□□ 0.24
SRRM4A7MD48 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SRRM4A7MD48 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SRRM4A7MD48 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.56■□□□□ 0.24
SRRM4A7MD48 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.56■□□□□ 0.24
SRRM4A7MD48 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.56■□□□□ 0.24
SRRM4A7MD48 KRT18P20-201ENST00000548986 1279 ntBASIC16.56■□□□□ 0.24
SRRM4A7MD48 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.56■□□□□ 0.24
SRRM4A7MD48 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SRRM4A7MD48 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.56■□□□□ 0.24
SRRM4A7MD48 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SRRM4A7MD48 AC020907.5-201ENST00000624372 1936 ntBASIC16.56■□□□□ 0.24
SRRM4A7MD48 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SRRM4A7MD48 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SRRM4A7MD48 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SRRM4A7MD48 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.56■□□□□ 0.24
SRRM4A7MD48 AL121603.2-201ENST00000557373 2117 ntBASIC16.55■□□□□ 0.24
SRRM4A7MD48 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SRRM4A7MD48 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.55■□□□□ 0.24
SRRM4A7MD48 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SRRM4A7MD48 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SRRM4A7MD48 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SRRM4A7MD48 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
SRRM4A7MD48 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.55■□□□□ 0.24
SRRM4A7MD48 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.55■□□□□ 0.24
SRRM4A7MD48 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.55■□□□□ 0.24
SRRM4A7MD48 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.55■□□□□ 0.24
SRRM4A7MD48 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.55■□□□□ 0.24
SRRM4A7MD48 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SRRM4A7MD48 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SRRM4A7MD48 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SRRM4A7MD48 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.55■□□□□ 0.24
SRRM4A7MD48 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
SRRM4A7MD48 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SRRM4A7MD48 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SRRM4A7MD48 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.55■□□□□ 0.24
SRRM4A7MD48 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SRRM4A7MD48 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SRRM4A7MD48 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SRRM4A7MD48 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SRRM4A7MD48 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SRRM4A7MD48 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SRRM4A7MD48 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.54■□□□□ 0.24
SRRM4A7MD48 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
SRRM4A7MD48 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SRRM4A7MD48 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SRRM4A7MD48 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SRRM4A7MD48 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.54■□□□□ 0.24
SRRM4A7MD48 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SRRM4A7MD48 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SRRM4A7MD48 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.54■□□□□ 0.24
SRRM4A7MD48 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SRRM4A7MD48 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SRRM4A7MD48 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRRM4A7MD48 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.53■□□□□ 0.24
SRRM4A7MD48 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SRRM4A7MD48 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.53■□□□□ 0.24
SRRM4A7MD48 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.53■□□□□ 0.24
SRRM4A7MD48 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SRRM4A7MD48 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SRRM4A7MD48 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
SRRM4A7MD48 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRRM4A7MD48 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.53■□□□□ 0.24
SRRM4A7MD48 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRRM4A7MD48 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRRM4A7MD48 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRRM4A7MD48 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRRM4A7MD48 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRRM4A7MD48 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SRRM4A7MD48 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.53■□□□□ 0.24
SRRM4A7MD48 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.53■□□□□ 0.24
SRRM4A7MD48 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.53■□□□□ 0.24
SRRM4A7MD48 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRRM4A7MD48 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.53■□□□□ 0.24
SRRM4A7MD48 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRRM4A7MD48 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRRM4A7MD48 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SRRM4A7MD48 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SRRM4A7MD48 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.53■□□□□ 0.24
SRRM4A7MD48 AC116050.2-201ENST00000612102 1779 ntBASIC16.53■□□□□ 0.24
SRRM4A7MD48 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRRM4A7MD48 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SRRM4A7MD48 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRRM4A7MD48 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.53■□□□□ 0.24
SRRM4A7MD48 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.53■□□□□ 0.24
SRRM4A7MD48 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SRRM4A7MD48 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SRRM4A7MD48 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM4A7MD48 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRRM4A7MD48 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.52■□□□□ 0.24
SRRM4A7MD48 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms