Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.21■□□□□ 0.83
C4orf47A7E2U8 C1orf229-201ENST00000623686 2258 ntBASIC20.21■□□□□ 0.83
C4orf47A7E2U8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C4orf47A7E2U8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
C4orf47A7E2U8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.21■□□□□ 0.83
C4orf47A7E2U8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
C4orf47A7E2U8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
C4orf47A7E2U8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
C4orf47A7E2U8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C4orf47A7E2U8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.21■□□□□ 0.83
C4orf47A7E2U8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
C4orf47A7E2U8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
C4orf47A7E2U8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.2■□□□□ 0.82
C4orf47A7E2U8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
C4orf47A7E2U8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C4orf47A7E2U8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
C4orf47A7E2U8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C4orf47A7E2U8 KRASP1-201ENST00000407852 552 ntBASIC20.2■□□□□ 0.82
C4orf47A7E2U8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.2■□□□□ 0.82
C4orf47A7E2U8 AC007322.3-201ENST00000426526 701 ntBASIC20.2■□□□□ 0.82
C4orf47A7E2U8 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.2■□□□□ 0.82
C4orf47A7E2U8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.2■□□□□ 0.82
C4orf47A7E2U8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
C4orf47A7E2U8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
C4orf47A7E2U8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
C4orf47A7E2U8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C4orf47A7E2U8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
C4orf47A7E2U8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
C4orf47A7E2U8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C4orf47A7E2U8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
C4orf47A7E2U8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
C4orf47A7E2U8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C4orf47A7E2U8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C4orf47A7E2U8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
C4orf47A7E2U8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
C4orf47A7E2U8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C4orf47A7E2U8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
C4orf47A7E2U8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
C4orf47A7E2U8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
C4orf47A7E2U8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.19■□□□□ 0.82
C4orf47A7E2U8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.19■□□□□ 0.82
C4orf47A7E2U8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C4orf47A7E2U8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
C4orf47A7E2U8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
C4orf47A7E2U8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
C4orf47A7E2U8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.19■□□□□ 0.82
C4orf47A7E2U8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
C4orf47A7E2U8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 AC105020.6-201ENST00000621523 1217 ntBASIC20.18■□□□□ 0.82
C4orf47A7E2U8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 CYP21A1P-202ENST00000354927 1481 ntBASIC20.18■□□□□ 0.82
C4orf47A7E2U8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C4orf47A7E2U8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C4orf47A7E2U8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.17■□□□□ 0.82
C4orf47A7E2U8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C4orf47A7E2U8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C4orf47A7E2U8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
C4orf47A7E2U8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
C4orf47A7E2U8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
C4orf47A7E2U8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
C4orf47A7E2U8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
C4orf47A7E2U8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
C4orf47A7E2U8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.17■□□□□ 0.82
C4orf47A7E2U8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
C4orf47A7E2U8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.17■□□□□ 0.82
C4orf47A7E2U8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.17■□□□□ 0.82
C4orf47A7E2U8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
C4orf47A7E2U8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
C4orf47A7E2U8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C4orf47A7E2U8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.16■□□□□ 0.82
C4orf47A7E2U8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.16■□□□□ 0.82
C4orf47A7E2U8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
C4orf47A7E2U8 AC139530.1-201ENST00000575312 1977 ntBASIC20.16■□□□□ 0.82
C4orf47A7E2U8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
C4orf47A7E2U8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
C4orf47A7E2U8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms