Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RBFOX3A6NFN3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RBFOX3A6NFN3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.23■□□□□ 0.19
RBFOX3A6NFN3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RBFOX3A6NFN3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RBFOX3A6NFN3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RBFOX3A6NFN3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RBFOX3A6NFN3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.23■□□□□ 0.19
RBFOX3A6NFN3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RBFOX3A6NFN3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RBFOX3A6NFN3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RBFOX3A6NFN3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RBFOX3A6NFN3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RBFOX3A6NFN3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RBFOX3A6NFN3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RBFOX3A6NFN3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 AC120498.9-201ENST00000339021 3867 ntBASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 KRT18P24-201ENST00000344739 1156 ntBASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 ABHD17AP5-201ENST00000580133 923 ntBASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RBFOX3A6NFN3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RBFOX3A6NFN3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RBFOX3A6NFN3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RBFOX3A6NFN3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RBFOX3A6NFN3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 AC093503.3-201ENST00000624917 2352 ntBASIC16.2■□□□□ 0.18
RBFOX3A6NFN3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms