Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RCCD1A6NED2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
RCCD1A6NED2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RCCD1A6NED2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.9■■□□□ 1.1
RCCD1A6NED2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.9■■□□□ 1.1
RCCD1A6NED2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.9■■□□□ 1.1
RCCD1A6NED2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.9■■□□□ 1.1
RCCD1A6NED2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RCCD1A6NED2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RCCD1A6NED2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RCCD1A6NED2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RCCD1A6NED2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RCCD1A6NED2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RCCD1A6NED2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
RCCD1A6NED2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RCCD1A6NED2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RCCD1A6NED2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.89■■□□□ 1.1
RCCD1A6NED2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.89■■□□□ 1.1
RCCD1A6NED2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
RCCD1A6NED2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RCCD1A6NED2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.89■■□□□ 1.09
RCCD1A6NED2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.89■■□□□ 1.09
RCCD1A6NED2 AC012414.1-201ENST00000556676 535 ntBASIC21.89■■□□□ 1.09
RCCD1A6NED2 AC106739.1-201ENST00000617035 715 ntBASIC21.89■■□□□ 1.09
RCCD1A6NED2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RCCD1A6NED2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
RCCD1A6NED2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RCCD1A6NED2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RCCD1A6NED2 AC092720.2-201ENST00000602388 1665 ntBASIC21.88■■□□□ 1.09
RCCD1A6NED2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RCCD1A6NED2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
RCCD1A6NED2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RCCD1A6NED2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RCCD1A6NED2 MIR939-201ENST00000401314 82 ntBASIC21.88■■□□□ 1.09
RCCD1A6NED2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.88■■□□□ 1.09
RCCD1A6NED2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.88■■□□□ 1.09
RCCD1A6NED2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RCCD1A6NED2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RCCD1A6NED2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.88■■□□□ 1.09
RCCD1A6NED2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.88■■□□□ 1.09
RCCD1A6NED2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RCCD1A6NED2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.88■■□□□ 1.09
RCCD1A6NED2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RCCD1A6NED2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RCCD1A6NED2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
RCCD1A6NED2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
RCCD1A6NED2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RCCD1A6NED2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RCCD1A6NED2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.87■■□□□ 1.09
RCCD1A6NED2 AL031432.3-201ENST00000607698 485 ntBASIC21.87■■□□□ 1.09
RCCD1A6NED2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
RCCD1A6NED2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RCCD1A6NED2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RCCD1A6NED2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RCCD1A6NED2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
RCCD1A6NED2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RCCD1A6NED2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RCCD1A6NED2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.87■■□□□ 1.09
RCCD1A6NED2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.87■■□□□ 1.09
RCCD1A6NED2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RCCD1A6NED2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RCCD1A6NED2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
RCCD1A6NED2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
RCCD1A6NED2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.86■■□□□ 1.09
RCCD1A6NED2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
RCCD1A6NED2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.86■■□□□ 1.09
RCCD1A6NED2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RCCD1A6NED2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RCCD1A6NED2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
RCCD1A6NED2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RCCD1A6NED2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.86■■□□□ 1.09
RCCD1A6NED2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.86■■□□□ 1.09
RCCD1A6NED2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.86■■□□□ 1.09
RCCD1A6NED2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.86■■□□□ 1.09
RCCD1A6NED2 AF213884.3-201ENST00000563833 479 ntBASIC21.86■■□□□ 1.09
RCCD1A6NED2 AC131212.1-201ENST00000613771 668 ntBASIC21.86■■□□□ 1.09
RCCD1A6NED2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.86■■□□□ 1.09
RCCD1A6NED2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RCCD1A6NED2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.86■■□□□ 1.09
RCCD1A6NED2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RCCD1A6NED2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RCCD1A6NED2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
RCCD1A6NED2 RASA4CP-201ENST00000424092 1398 ntBASIC21.86■■□□□ 1.09
RCCD1A6NED2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.85■■□□□ 1.09
RCCD1A6NED2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RCCD1A6NED2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RCCD1A6NED2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.85■■□□□ 1.09
RCCD1A6NED2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RCCD1A6NED2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RCCD1A6NED2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.85■■□□□ 1.09
RCCD1A6NED2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RCCD1A6NED2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RCCD1A6NED2 EDA-201ENST00000338901 1233 ntBASIC21.85■■□□□ 1.09
RCCD1A6NED2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RCCD1A6NED2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.85■■□□□ 1.09
RCCD1A6NED2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.85■■□□□ 1.09
RCCD1A6NED2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RCCD1A6NED2 SMG8-203ENST00000578922 2178 ntBASIC21.85■■□□□ 1.09
RCCD1A6NED2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RCCD1A6NED2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms