Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00862A6NCI5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LINC00862A6NCI5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC00862A6NCI5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00862A6NCI5 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.78■□□□□ 0.28
LINC00862A6NCI5 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC00862A6NCI5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00862A6NCI5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LINC00862A6NCI5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC00862A6NCI5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00862A6NCI5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00862A6NCI5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00862A6NCI5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC00862A6NCI5 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LINC00862A6NCI5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LINC00862A6NCI5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00862A6NCI5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00862A6NCI5 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LINC00862A6NCI5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00862A6NCI5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00862A6NCI5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00862A6NCI5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00862A6NCI5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00862A6NCI5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.77■□□□□ 0.28
LINC00862A6NCI5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00862A6NCI5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00862A6NCI5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00862A6NCI5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.77■□□□□ 0.28
LINC00862A6NCI5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.77■□□□□ 0.28
LINC00862A6NCI5 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LINC00862A6NCI5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00862A6NCI5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00862A6NCI5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.77■□□□□ 0.28
LINC00862A6NCI5 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC16.77■□□□□ 0.28
LINC00862A6NCI5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
LINC00862A6NCI5 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.77■□□□□ 0.27
LINC00862A6NCI5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LINC00862A6NCI5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.77■□□□□ 0.27
LINC00862A6NCI5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LINC00862A6NCI5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LINC00862A6NCI5 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LINC00862A6NCI5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
LINC00862A6NCI5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
LINC00862A6NCI5 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LINC00862A6NCI5 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC00862A6NCI5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00862A6NCI5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.76■□□□□ 0.27
LINC00862A6NCI5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00862A6NCI5 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00862A6NCI5 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
LINC00862A6NCI5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LINC00862A6NCI5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC00862A6NCI5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00862A6NCI5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00862A6NCI5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
LINC00862A6NCI5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00862A6NCI5 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00862A6NCI5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC00862A6NCI5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00862A6NCI5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00862A6NCI5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 AC121338.2-201ENST00000622535 1744 ntBASIC16.75■□□□□ 0.27
LINC00862A6NCI5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00862A6NCI5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.74■□□□□ 0.27
LINC00862A6NCI5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.74■□□□□ 0.27
LINC00862A6NCI5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00862A6NCI5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.74■□□□□ 0.27
LINC00862A6NCI5 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00862A6NCI5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
LINC00862A6NCI5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.74■□□□□ 0.27
LINC00862A6NCI5 AC009113.1-201ENST00000570267 2443 ntBASIC16.74■□□□□ 0.27
LINC00862A6NCI5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
LINC00862A6NCI5 AC068880.1-201ENST00000507289 2297 ntBASIC16.74■□□□□ 0.27
LINC00862A6NCI5 HLA-V-202ENST00000446817 847 ntBASIC16.74■□□□□ 0.27
LINC00862A6NCI5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LINC00862A6NCI5 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LINC00862A6NCI5 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms