Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC189A1A4V9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC189A1A4V9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC189A1A4V9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC189A1A4V9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC189A1A4V9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CCDC189A1A4V9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.52■□□□□ 0.88
CCDC189A1A4V9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC189A1A4V9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC189A1A4V9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC189A1A4V9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CCDC189A1A4V9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC189A1A4V9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC189A1A4V9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC189A1A4V9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC189A1A4V9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC189A1A4V9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC189A1A4V9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.52■□□□□ 0.87
CCDC189A1A4V9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.52■□□□□ 0.87
CCDC189A1A4V9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC189A1A4V9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC189A1A4V9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC189A1A4V9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC189A1A4V9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC189A1A4V9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC189A1A4V9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC189A1A4V9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC189A1A4V9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC189A1A4V9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC189A1A4V9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.51■□□□□ 0.87
CCDC189A1A4V9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC189A1A4V9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC189A1A4V9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
CCDC189A1A4V9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC189A1A4V9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC189A1A4V9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC189A1A4V9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC189A1A4V9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CCDC189A1A4V9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC189A1A4V9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC189A1A4V9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC189A1A4V9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC189A1A4V9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC189A1A4V9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC189A1A4V9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC189A1A4V9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC189A1A4V9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC189A1A4V9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC189A1A4V9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC189A1A4V9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CCDC189A1A4V9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC189A1A4V9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CCDC189A1A4V9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC189A1A4V9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC189A1A4V9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CCDC189A1A4V9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC189A1A4V9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CCDC189A1A4V9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC189A1A4V9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC189A1A4V9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC189A1A4V9 AC006128.1-201ENST00000624704 1661 ntBASIC20.49■□□□□ 0.87
CCDC189A1A4V9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC189A1A4V9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC189A1A4V9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC189A1A4V9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC189A1A4V9 LINC01006-201ENST00000333319 2292 ntBASIC20.49■□□□□ 0.87
CCDC189A1A4V9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CCDC189A1A4V9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC189A1A4V9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CCDC189A1A4V9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC189A1A4V9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC189A1A4V9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC189A1A4V9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC189A1A4V9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC189A1A4V9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC189A1A4V9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC189A1A4V9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCDC189A1A4V9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC189A1A4V9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC189A1A4V9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC189A1A4V9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC189A1A4V9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
CCDC189A1A4V9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CCDC189A1A4V9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC189A1A4V9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CCDC189A1A4V9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CCDC189A1A4V9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC189A1A4V9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CCDC189A1A4V9 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC189A1A4V9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC189A1A4V9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC189A1A4V9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC189A1A4V9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC189A1A4V9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CCDC189A1A4V9 POU5F1P4-201ENST00000413175 1085 ntBASIC20.47■□□□□ 0.87
CCDC189A1A4V9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC189A1A4V9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC189A1A4V9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC189A1A4V9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC189A1A4V9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms