Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHISA3A0PJX4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.95■□□□□ 0.46
SHISA3A0PJX4 AC055733.4-201ENST00000638462 1354 ntBASIC17.95■□□□□ 0.46
SHISA3A0PJX4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.95■□□□□ 0.46
SHISA3A0PJX4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHISA3A0PJX4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHISA3A0PJX4 SERBP1P1-201ENST00000396021 1160 ntBASIC17.95■□□□□ 0.46
SHISA3A0PJX4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.95■□□□□ 0.46
SHISA3A0PJX4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.95■□□□□ 0.46
SHISA3A0PJX4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.95■□□□□ 0.46
SHISA3A0PJX4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.95■□□□□ 0.46
SHISA3A0PJX4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.95■□□□□ 0.46
SHISA3A0PJX4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHISA3A0PJX4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SHISA3A0PJX4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHISA3A0PJX4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHISA3A0PJX4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SHISA3A0PJX4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.95■□□□□ 0.46
SHISA3A0PJX4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SHISA3A0PJX4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.94■□□□□ 0.46
SHISA3A0PJX4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHISA3A0PJX4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHISA3A0PJX4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHISA3A0PJX4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.94■□□□□ 0.46
SHISA3A0PJX4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHISA3A0PJX4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHISA3A0PJX4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHISA3A0PJX4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHISA3A0PJX4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHISA3A0PJX4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.94■□□□□ 0.46
SHISA3A0PJX4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SHISA3A0PJX4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHISA3A0PJX4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.94■□□□□ 0.46
SHISA3A0PJX4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHISA3A0PJX4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHISA3A0PJX4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SHISA3A0PJX4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SHISA3A0PJX4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHISA3A0PJX4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.94■□□□□ 0.46
SHISA3A0PJX4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHISA3A0PJX4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SHISA3A0PJX4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHISA3A0PJX4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHISA3A0PJX4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHISA3A0PJX4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHISA3A0PJX4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.92■□□□□ 0.46
SHISA3A0PJX4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHISA3A0PJX4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.92■□□□□ 0.46
SHISA3A0PJX4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHISA3A0PJX4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHISA3A0PJX4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.92■□□□□ 0.46
SHISA3A0PJX4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHISA3A0PJX4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.92■□□□□ 0.46
SHISA3A0PJX4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SHISA3A0PJX4 SRD5A1P1-201ENST00000442297 786 ntBASIC17.92■□□□□ 0.46
SHISA3A0PJX4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.92■□□□□ 0.46
SHISA3A0PJX4 MIR3621-201ENST00000580529 85 ntBASIC17.92■□□□□ 0.46
SHISA3A0PJX4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.92■□□□□ 0.46
SHISA3A0PJX4 AC092171.4-201ENST00000609130 632 ntBASIC17.92■□□□□ 0.46
SHISA3A0PJX4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SHISA3A0PJX4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SHISA3A0PJX4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.92■□□□□ 0.46
SHISA3A0PJX4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.92■□□□□ 0.46
SHISA3A0PJX4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SHISA3A0PJX4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHISA3A0PJX4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SHISA3A0PJX4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms