Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 DUX4L16-201ENST00000555130 1264 ntBASIC21.56■■□□□ 1.04
TCRBV5S1A1TA0A578 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TCRBV5S1A1TA0A578 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.56■■□□□ 1.04
TCRBV5S1A1TA0A578 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TCRBV5S1A1TA0A578 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TCRBV5S1A1TA0A578 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TCRBV5S1A1TA0A578 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.55■■□□□ 1.04
TCRBV5S1A1TA0A578 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TCRBV5S1A1TA0A578 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TCRBV5S1A1TA0A578 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TCRBV5S1A1TA0A578 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TCRBV5S1A1TA0A578 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TCRBV5S1A1TA0A578 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.55■■□□□ 1.04
TCRBV5S1A1TA0A578 CNN2P6-201ENST00000439038 900 ntBASIC21.55■■□□□ 1.04
TCRBV5S1A1TA0A578 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.55■■□□□ 1.04
TCRBV5S1A1TA0A578 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TCRBV5S1A1TA0A578 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.55■■□□□ 1.04
TCRBV5S1A1TA0A578 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.55■■□□□ 1.04
TCRBV5S1A1TA0A578 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.55■■□□□ 1.04
TCRBV5S1A1TA0A578 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
TCRBV5S1A1TA0A578 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TCRBV5S1A1TA0A578 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
TCRBV5S1A1TA0A578 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TCRBV5S1A1TA0A578 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TCRBV5S1A1TA0A578 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TCRBV5S1A1TA0A578 AL162377.1-201ENST00000618844 1793 ntBASIC21.54■■□□□ 1.04
TCRBV5S1A1TA0A578 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
TCRBV5S1A1TA0A578 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.54■■□□□ 1.04
TCRBV5S1A1TA0A578 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
TCRBV5S1A1TA0A578 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TCRBV5S1A1TA0A578 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TCRBV5S1A1TA0A578 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.54■■□□□ 1.04
TCRBV5S1A1TA0A578 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.54■■□□□ 1.04
TCRBV5S1A1TA0A578 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
TCRBV5S1A1TA0A578 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.54■■□□□ 1.04
TCRBV5S1A1TA0A578 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TCRBV5S1A1TA0A578 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TCRBV5S1A1TA0A578 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.53■■□□□ 1.04
TCRBV5S1A1TA0A578 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV5S1A1TA0A578 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV5S1A1TA0A578 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.53■■□□□ 1.04
TCRBV5S1A1TA0A578 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV5S1A1TA0A578 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV5S1A1TA0A578 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV5S1A1TA0A578 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV5S1A1TA0A578 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV5S1A1TA0A578 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.53■■□□□ 1.04
TCRBV5S1A1TA0A578 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.53■■□□□ 1.04
TCRBV5S1A1TA0A578 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.53■■□□□ 1.04
TCRBV5S1A1TA0A578 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
TCRBV5S1A1TA0A578 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV5S1A1TA0A578 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV5S1A1TA0A578 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
TCRBV5S1A1TA0A578 AC011767.1-201ENST00000617410 1153 ntBASIC21.53■■□□□ 1.04
TCRBV5S1A1TA0A578 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
TCRBV5S1A1TA0A578 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.52■■□□□ 1.04
TCRBV5S1A1TA0A578 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TCRBV5S1A1TA0A578 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TCRBV5S1A1TA0A578 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.52■■□□□ 1.04
TCRBV5S1A1TA0A578 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.52■■□□□ 1.04
TCRBV5S1A1TA0A578 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TCRBV5S1A1TA0A578 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TCRBV5S1A1TA0A578 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TCRBV5S1A1TA0A578 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.52■■□□□ 1.04
TCRBV5S1A1TA0A578 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.52■■□□□ 1.04
TCRBV5S1A1TA0A578 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.52■■□□□ 1.04
TCRBV5S1A1TA0A578 AL162412.1-201ENST00000567129 965 ntBASIC21.52■■□□□ 1.04
TCRBV5S1A1TA0A578 AC022517.1-201ENST00000592429 346 ntBASIC21.52■■□□□ 1.04
TCRBV5S1A1TA0A578 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TCRBV5S1A1TA0A578 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.52■■□□□ 1.04
TCRBV5S1A1TA0A578 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TCRBV5S1A1TA0A578 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TCRBV5S1A1TA0A578 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TCRBV5S1A1TA0A578 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.52■■□□□ 1.04
TCRBV5S1A1TA0A578 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TCRBV5S1A1TA0A578 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TCRBV5S1A1TA0A578 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
TCRBV5S1A1TA0A578 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
TCRBV5S1A1TA0A578 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
TCRBV5S1A1TA0A578 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
TCRBV5S1A1TA0A578 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TCRBV5S1A1TA0A578 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBV5S1A1TA0A578 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBV5S1A1TA0A578 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.51■■□□□ 1.03
TCRBV5S1A1TA0A578 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.51■■□□□ 1.03
TCRBV5S1A1TA0A578 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
TCRBV5S1A1TA0A578 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBV5S1A1TA0A578 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
TCRBV5S1A1TA0A578 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBV5S1A1TA0A578 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TCRBV5S1A1TA0A578 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBV5S1A1TA0A578 AL591742.1-201ENST00000604433 565 ntBASIC21.51■■□□□ 1.03
TCRBV5S1A1TA0A578 AC016405.3-201ENST00000607710 860 ntBASIC21.51■■□□□ 1.03
TCRBV5S1A1TA0A578 FAM21FP-204ENST00000608637 956 ntBASIC21.51■■□□□ 1.03
TCRBV5S1A1TA0A578 AC013268.1-206ENST00000638368 961 ntBASIC21.51■■□□□ 1.03
TCRBV5S1A1TA0A578 AC112229.1-201ENST00000639295 961 ntBASIC21.51■■□□□ 1.03
TCRBV5S1A1TA0A578 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBV5S1A1TA0A578 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBV5S1A1TA0A578 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBV5S1A1TA0A578 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms