Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 AC027702.1-201ENST00000563810 1770 ntBASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 LINC01006-201ENST00000333319 2292 ntBASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 BID-203ENST00000399765 1879 ntTSL 2 BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 AC034268.1-201ENST00000441047 882 ntBASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV6-4A0A1B0GX49 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 RBM17P2-201ENST00000616397 1405 ntBASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 AC097381.1-201ENST00000429019 1296 ntBASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
TRBV6-4A0A1B0GX49 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 AC019069.1-201ENST00000610008 1333 ntBASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV6-4A0A1B0GX49 AC073314.1-201ENST00000568729 2216 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms