Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-1A0A0K0K1D8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV6-1A0A0K0K1D8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 AL020996.1-203ENST00000536896 2307 ntBASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 TMEM179-206ENST00000616017 1645 ntBASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-1A0A0K0K1D8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 AC125437.2-201ENST00000625180 2167 ntBASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 BX842568.3-201ENST00000418104 571 ntBASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 RARRES2P1-201ENST00000474487 481 ntBASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-1A0A0K0K1D8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 MIR2861-201ENST00000636310 90 ntBASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
TRBV6-1A0A0K0K1D8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-1A0A0K0K1D8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms