Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV4A0A0C4DH28 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 KRT19P1-201ENST00000405746 1186 ntBASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 KRT16P2-201ENST00000414673 1423 ntBASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV4A0A0C4DH28 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 AC121338.2-201ENST00000622535 1744 ntBASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRGV4A0A0C4DH28 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 AC019069.1-201ENST00000610008 1333 ntBASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 AC034268.1-201ENST00000441047 882 ntBASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 AC004854.2-201ENST00000608450 1441 ntBASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRGV4A0A0C4DH28 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRGV4A0A0C4DH28 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRGV4A0A0C4DH28 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRGV4A0A0C4DH28 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRGV4A0A0C4DH28 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRGV4A0A0C4DH28 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRGV4A0A0C4DH28 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.71□□□□□ -0.05
TRGV4A0A0C4DH28 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms