Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-4A0A0B4J246 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-4A0A0B4J246 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-4A0A0B4J246 AC091305.1-201ENST00000479476 895 ntBASIC14.36□□□□□ -0.11
TRAV8-4A0A0B4J246 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.36□□□□□ -0.11
TRAV8-4A0A0B4J246 SMUG1P1-201ENST00000590640 811 ntBASIC14.36□□□□□ -0.11
TRAV8-4A0A0B4J246 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV8-4A0A0B4J246 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-4A0A0B4J246 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRAV8-4A0A0B4J246 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-4A0A0B4J246 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-4A0A0B4J246 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV8-4A0A0B4J246 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-4A0A0B4J246 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-4A0A0B4J246 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-4A0A0B4J246 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
TRAV8-4A0A0B4J246 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-4A0A0B4J246 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-4A0A0B4J246 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 MFF-208ENST00000409616 1247 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 AC087289.5-201ENST00000586076 3175 ntBASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-4A0A0B4J246 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 NALT1-201ENST00000429224 738 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 AC026471.1-201ENST00000564629 3026 ntBASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 AP006587.3-201ENST00000525742 1516 ntBASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 TSPY26P-201ENST00000476365 1326 ntBASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 AIRN-201ENST00000601203 4374 ntBASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV8-4A0A0B4J246 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV8-4A0A0B4J246 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV8-4A0A0B4J246 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC14.33□□□□□ -0.11
TRAV8-4A0A0B4J246 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV8-4A0A0B4J246 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 AP001330.3-201ENST00000520123 633 ntBASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 AL139246.5-201ENST00000606645 996 ntBASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 AC105233.4-201ENST00000642045 216 ntBASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms