Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-1A0A0B4J245 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV12-1A0A0B4J245 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 AC005332.7-201ENST00000614046 2005 ntBASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 RBM38-205ENST00000440234 686 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 RPS2-202ENST00000526522 924 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 AC125437.2-201ENST00000625180 2167 ntBASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 AL158211.5-201ENST00000623583 2518 ntBASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV12-1A0A0B4J245 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 AC026471.1-201ENST00000564629 3026 ntBASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 SENP5-202ENST00000419026 973 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV12-1A0A0B4J245 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV12-1A0A0B4J245 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV12-1A0A0B4J245 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRAV12-1A0A0B4J245 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV12-1A0A0B4J245 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV12-1A0A0B4J245 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV12-1A0A0B4J245 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV12-1A0A0B4J245 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV12-1A0A0B4J245 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV12-1A0A0B4J245 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRAV12-1A0A0B4J245 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV12-1A0A0B4J245 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
TRAV12-1A0A0B4J245 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV12-1A0A0B4J245 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV12-1A0A0B4J245 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms