Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.52□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 AC012414.1-201ENST00000556676 535 ntBASIC14.52□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC14.52□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms