Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV9-1A0A075B6T8 AC138932.1-201ENST00000534164 6830 ntBASIC15.46■□□□□ 0.07
TRAV9-1A0A075B6T8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV9-1A0A075B6T8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV9-1A0A075B6T8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV9-1A0A075B6T8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV9-1A0A075B6T8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV9-1A0A075B6T8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV9-1A0A075B6T8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV9-1A0A075B6T8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV9-1A0A075B6T8 AL138781.2-201ENST00000617896 1843 ntBASIC15.46■□□□□ 0.07
TRAV9-1A0A075B6T8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV9-1A0A075B6T8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC15.46■□□□□ 0.07
TRAV9-1A0A075B6T8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV9-1A0A075B6T8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV9-1A0A075B6T8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV9-1A0A075B6T8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV9-1A0A075B6T8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.46■□□□□ 0.06
TRAV9-1A0A075B6T8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.46■□□□□ 0.06
TRAV9-1A0A075B6T8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.06
TRAV9-1A0A075B6T8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-1A0A075B6T8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRAV9-1A0A075B6T8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-1A0A075B6T8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV9-1A0A075B6T8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRAV9-1A0A075B6T8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRAV9-1A0A075B6T8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRAV9-1A0A075B6T8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV9-1A0A075B6T8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV9-1A0A075B6T8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-1A0A075B6T8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-1A0A075B6T8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-1A0A075B6T8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-1A0A075B6T8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV9-1A0A075B6T8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRAV9-1A0A075B6T8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-1A0A075B6T8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-1A0A075B6T8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-1A0A075B6T8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-1A0A075B6T8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-1A0A075B6T8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV9-1A0A075B6T8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRAV9-1A0A075B6T8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV9-1A0A075B6T8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRAV9-1A0A075B6T8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-1A0A075B6T8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRAV9-1A0A075B6T8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV9-1A0A075B6T8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
TRAV9-1A0A075B6T8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-1A0A075B6T8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC15.44■□□□□ 0.06
TRAV9-1A0A075B6T8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-1A0A075B6T8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-1A0A075B6T8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-1A0A075B6T8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV9-1A0A075B6T8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-1A0A075B6T8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRAV9-1A0A075B6T8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV9-1A0A075B6T8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRAV9-1A0A075B6T8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-1A0A075B6T8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV9-1A0A075B6T8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV9-1A0A075B6T8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 AL499627.2-201ENST00000606283 725 ntBASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 AC092720.2-201ENST00000602388 1665 ntBASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 Z82202.1-201ENST00000623446 1880 ntBASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV9-1A0A075B6T8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV9-1A0A075B6T8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms