Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 HS6ST2-AS1-201ENST00000455269 550 ntTSL 3 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 CHCHD4P3-201ENST00000455954 410 ntBASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 AC018450.2-201ENST00000492307 368 ntTSL 3 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 LINC02509-201ENST00000508790 691 ntTSL 3 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 APOBEC3B-AS1-201ENST00000513758 691 ntTSL 3 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 EVX1-AS-201ENST00000517726 480 ntTSL 3 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 AC100849.1-203ENST00000518417 723 ntTSL 4 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 TBCA-208ENST00000520361 446 ntTSL 2 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 CARD8-224ENST00000522431 622 ntTSL 2 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 CRYAB-215ENST00000533971 981 ntTSL 2 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 TUBBP8-201ENST00000560273 1232 ntBASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 AC092114.1-201ENST00000567227 532 ntTSL 4 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 RN7SL198P-201ENST00000583190 258 ntBASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 FAM95B1-210ENST00000591605 743 ntTSL 5 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 SQSTM1P1-201ENST00000603451 859 ntBASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 ZNF678-205ENST00000608949 929 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 AC012594.1-253ENST00000609532 846 ntTSL 5 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 NDUFA6-AS1-216ENST00000621190 766 ntTSL 5 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 AP000962.2-201ENST00000624971 1101 ntBASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 AC012594.1-214ENST00000630496 858 ntTSL 5 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 AL390726.6-203ENST00000636076 473 ntBASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 SGK1-203ENST00000367857 2414 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 MRPL27-202ENST00000442592 2441 ntTSL 2 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 LINC02254-201ENST00000558621 1726 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 ZNF780A-201ENST00000340963 3674 ntAPPRIS P3 TSL 2 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 KPNA2-201ENST00000330459 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 SMIM19-204ENST00000438528 2958 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 HIPK1-206ENST00000369559 3424 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 ZC4H2-203ENST00000447788 2649 ntTSL 2 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 ADGRG1-202ENST00000456916 3860 ntTSL 2 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 NTNG2-201ENST00000372179 3984 ntTSL 5 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 NPHP1-202ENST00000355301 1932 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 LINC00598-214ENST00000637523 1943 ntTSL 5 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 AC008758.1-201ENST00000428311 4505 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 EZH1-205ENST00000585893 2394 ntTSL 2 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 EZH1-217ENST00000590078 2392 ntTSL 2 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 IGSF1-205ENST00000370904 5413 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 AC109347.1-201ENST00000562919 2036 ntBASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 FAM69A-203ENST00000613902 2468 ntTSL 4 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 MX1-203ENST00000398600 3470 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 AC091962.1-201ENST00000561496 1765 ntBASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 COL21A1-201ENST00000244728 4339 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
NPIPA3F8WFD2 KIAA1841-203ENST00000402291 4516 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 TRIM60-204ENST00000512596 1888 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 ADH4-201ENST00000265512 1993 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 ARID4A-201ENST00000348476 5562 ntTSL 5 BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 TMEM215-201ENST00000342743 3581 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 ZNF418-201ENST00000396147 3694 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 PSMA3-AS1-204ENST00000554360 2475 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 GSDMC-204ENST00000619643 1831 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 MRPL55-216ENST00000366744 726 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 LCN1P1-201ENST00000372031 505 ntBASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 LINC00525-201ENST00000412730 1188 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 AL162584.1-201ENST00000437097 633 ntTSL 3 BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 AC092042.3-203ENST00000443313 950 ntTSL 2 BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 AL096701.1-201ENST00000445477 457 ntBASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 AL672142.1-201ENST00000482796 378 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 AC069287.2-201ENST00000526963 574 ntTSL 3 BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 IL22-202ENST00000538666 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 AL160314.2-201ENST00000554857 662 ntTSL 4 BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 LINC02314-201ENST00000555725 516 ntTSL 2 BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 KRT18P47-201ENST00000561341 977 ntBASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 AC004706.1-201ENST00000576138 879 ntTSL 3 BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 AC010761.2-201ENST00000584779 442 ntTSL 5 BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 IPO4-221ENST00000625289 297 ntTSL 5 BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 AC084879.1-201ENST00000636165 1201 ntBASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 MAPK10-368ENST00000641911 2238 ntAPPRIS P2 BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 ARHGAP19-203ENST00000371027 2301 ntTSL 2 BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 ITGB6-203ENST00000409872 2501 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 AC104472.1-201ENST00000399242 1585 ntBASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 AC005307.1-201ENST00000567877 1570 ntTSL 3 BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 MAGEB16-201ENST00000399985 1667 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 TRIM16L-201ENST00000395671 1982 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 TRIM16-211ENST00000577886 1979 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 GRIK1-207ENST00000399914 3624 ntTSL 5 BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 UPF2-202ENST00000357604 5193 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 GIMAP5-201ENST00000358647 2291 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 LIN52-205ENST00000555028 2776 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
NPIPA3F8WFD2 LIFR-AS1-202ENST00000500817 1342 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 LPXN-201ENST00000395074 1833 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 MAT2B-202ENST00000321757 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 HMGCLL1-206ENST00000428842 2437 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 CEP57L1-205ENST00000517392 2771 ntAPPRIS P3 TSL 2 BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 EMC4-202ENST00000267750 1036 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 SAMD3-201ENST00000324172 993 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 SIRPG-203ENST00000344103 1042 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 SNORA71C-201ENST00000364642 134 ntBASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 S100A4-203ENST00000368715 573 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 PRH2-202ENST00000396400 673 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 STPG3-202ENST00000412566 1191 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
NPIPA3F8WFD2 ING4-203ENST00000412586 741 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms