Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC073255.1-201ENST00000624149 177 ntBASIC9.74□□□□□ -0.85
SLC1A1P43005 LINC01002-213ENST00000632086 918 ntTSL 5 BASIC9.74□□□□□ -0.85
SLC1A1P43005 TIMP2-203ENST00000585421 3345 ntTSL 3 BASIC9.74□□□□□ -0.85
SLC1A1P43005 ERBB3-203ENST00000415288 4353 ntTSL 2 BASIC9.74□□□□□ -0.85
SLC1A1P43005 TXNRD1-204ENST00000429002 3855 ntTSL 5 BASIC9.74□□□□□ -0.85
SLC1A1P43005 AL034417.4-201ENST00000641354 2101 ntBASIC9.74□□□□□ -0.85
SLC1A1P43005 DMP1-202ENST00000339673 2682 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
SLC1A1P43005 IL7-202ENST00000379113 1888 ntTSL 5 BASIC9.74□□□□□ -0.85
SLC1A1P43005 RNPC3-201ENST00000423855 1872 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
SLC1A1P43005 HTR4-202ENST00000362016 2979 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SLC1A1P43005 KIF2C-201ENST00000372217 2955 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SLC1A1P43005 CLUL1-203ENST00000540035 2199 ntTSL 2 BASIC9.74□□□□□ -0.85
SLC1A1P43005 AL627309.1-201ENST00000466430 2748 ntTSL 5 BASIC9.74□□□□□ -0.85
SLC1A1P43005 DCLRE1C-201ENST00000357717 2228 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SLC1A1P43005 AC027613.1-202ENST00000513136 1957 ntBASIC9.74□□□□□ -0.85
SLC1A1P43005 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 LHX9-203ENST00000367390 7413 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 MYH8-201ENST00000403437 6041 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SLC1A1P43005 BLNK-202ENST00000371176 1715 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
SLC1A1P43005 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
SLC1A1P43005 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 SERPINB3-201ENST00000283752 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 WDR20-206ENST00000454394 2067 ntTSL 2 BASIC9.73□□□□□ -0.85
SLC1A1P43005 CTAGE12P-201ENST00000400348 2364 ntBASIC9.73□□□□□ -0.85
SLC1A1P43005 TAF9B-201ENST00000341864 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 IL1A-201ENST00000263339 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 AC008764.10-201ENST00000625135 1830 ntBASIC9.73□□□□□ -0.85
SLC1A1P43005 ZNF233-201ENST00000391958 2784 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
SLC1A1P43005 COL21A1-201ENST00000244728 4339 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 HERC2P3-206ENST00000429257 4088 ntBASIC9.73□□□□□ -0.85
SLC1A1P43005 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 RN7SKP65-201ENST00000410278 313 ntBASIC9.73□□□□□ -0.85
SLC1A1P43005 AC245884.5-201ENST00000417373 170 ntBASIC9.73□□□□□ -0.85
SLC1A1P43005 AC009495.1-201ENST00000428888 372 ntTSL 5 BASIC9.73□□□□□ -0.85
SLC1A1P43005 LENG8-AS1-202ENST00000429922 871 ntTSL 4 BASIC9.73□□□□□ -0.85
SLC1A1P43005 AP001476.2-201ENST00000435738 355 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 AC026477.1-201ENST00000439391 616 ntBASIC9.73□□□□□ -0.85
SLC1A1P43005 AL662795.1-201ENST00000448756 634 ntBASIC9.73□□□□□ -0.85
SLC1A1P43005 SSU72P1-201ENST00000449911 583 ntBASIC9.73□□□□□ -0.85
SLC1A1P43005 AC069285.1-201ENST00000450891 419 ntTSL 3 BASIC9.73□□□□□ -0.85
SLC1A1P43005 AC092953.1-201ENST00000460975 543 ntBASIC9.73□□□□□ -0.85
SLC1A1P43005 GAPDHP70-201ENST00000515281 1045 ntBASIC9.73□□□□□ -0.85
SLC1A1P43005 AC134698.2-201ENST00000519172 311 ntBASIC9.73□□□□□ -0.85
SLC1A1P43005 AC112694.1-201ENST00000541939 570 ntTSL 4 BASIC9.73□□□□□ -0.85
SLC1A1P43005 RAD52-218ENST00000545564 681 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 LRRC37A13P-201ENST00000546055 287 ntBASIC9.73□□□□□ -0.85
SLC1A1P43005 NR2F2-AS1-203ENST00000558929 574 ntTSL 5 BASIC9.73□□□□□ -0.85
SLC1A1P43005 RPL17-205ENST00000579408 859 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 AC005828.2-201ENST00000580253 562 ntTSL 4 BASIC9.73□□□□□ -0.85
SLC1A1P43005 AC005828.4-201ENST00000584608 552 ntTSL 4 BASIC9.73□□□□□ -0.85
SLC1A1P43005 AC007795.1-201ENST00000585883 437 ntTSL 5 BASIC9.73□□□□□ -0.85
SLC1A1P43005 Metazoa_SRP.92-201ENST00000613789 329 ntBASIC9.73□□□□□ -0.85
SLC1A1P43005 PRB4-204ENST00000621732 709 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
SLC1A1P43005 LINC00032-201ENST00000638495 1040 ntBASIC9.73□□□□□ -0.85
SLC1A1P43005 PLA2G4A-201ENST00000367466 2875 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 TBC1D8B-201ENST00000276175 3538 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
SLC1A1P43005 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 HSP90AB1-201ENST00000353801 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 MRPL30-201ENST00000338148 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 RAB3GAP1-201ENST00000264158 4914 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 PNMA8C-201ENST00000617053 4255 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
SLC1A1P43005 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
SLC1A1P43005 FHAD1-206ENST00000375998 4355 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SLC1A1P43005 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC9.73□□□□□ -0.85
SLC1A1P43005 AIG1-202ENST00000357847 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 FBXW12-202ENST00000415155 1370 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 LINC02292-201ENST00000554522 1701 ntTSL 2 BASIC9.73□□□□□ -0.85
SLC1A1P43005 AMPD3-208ENST00000528723 2753 ntTSL 2 BASIC9.73□□□□□ -0.85
SLC1A1P43005 PDPN-201ENST00000294489 3104 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 PABPC4L-201ENST00000421491 4944 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
SLC1A1P43005 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
SLC1A1P43005 RCAN1-203ENST00000381135 2526 ntTSL 2 BASIC9.73□□□□□ -0.85
SLC1A1P43005 SLFN12-202ENST00000394562 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SLC1A1P43005 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SLC1A1P43005 OR6C6-201ENST00000358433 1521 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
SLC1A1P43005 OSBPL3-202ENST00000396429 2707 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SLC1A1P43005 ENPP6-201ENST00000296741 3936 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SLC1A1P43005 ELAVL4-204ENST00000371823 1591 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SLC1A1P43005 MED23-202ENST00000368053 2811 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SLC1A1P43005 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
SLC1A1P43005 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SLC1A1P43005 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SLC1A1P43005 TGFB3-201ENST00000238682 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SLC1A1P43005 ZNF35-201ENST00000296092 2503 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SLC1A1P43005 DHX9-201ENST00000367549 4240 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SLC1A1P43005 RPL26L1-201ENST00000265100 722 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SLC1A1P43005 SPRR4-201ENST00000328051 733 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SLC1A1P43005 JAKMIP2-202ENST00000333010 2992 ntTSL 2 BASIC9.72□□□□□ -0.85
SLC1A1P43005 RAET1E-202ENST00000367363 817 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SLC1A1P43005 CEBPZOS-202ENST00000397064 568 ntAPPRIS P1 TSL 4 BASIC9.72□□□□□ -0.85
SLC1A1P43005 HBA1-202ENST00000397797 504 ntTSL 2 BASIC9.72□□□□□ -0.85
SLC1A1P43005 AL627402.1-201ENST00000405276 735 ntBASIC9.72□□□□□ -0.85
SLC1A1P43005 AL139246.1-201ENST00000424657 455 ntTSL 3 BASIC9.72□□□□□ -0.85
SLC1A1P43005 RDH11-202ENST00000428130 1064 ntTSL 2 BASIC9.72□□□□□ -0.85
SLC1A1P43005 AL358176.4-201ENST00000428891 675 ntTSL 2 BASIC9.72□□□□□ -0.85
SLC1A1P43005 WBP1LP6-201ENST00000438434 424 ntBASIC9.72□□□□□ -0.85
SLC1A1P43005 AC016738.2-201ENST00000439150 493 ntTSL 3 BASIC9.72□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms