Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 AC026362.2-201ENST00000624878 5566 ntBASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 MAGI2-236ENST00000637441 5822 ntTSL 5 BASIC9.85□□□□□ -0.83
SYCE2Q6PIF2 MTUS2-AS1-201ENST00000323380 1992 ntTSL 5 BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 SSFA2-203ENST00000409136 3610 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 PAK5-202ENST00000378423 4613 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 CCDC69-201ENST00000355417 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 B4GALNT2-203ENST00000504681 1819 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 TEX10-201ENST00000374902 3074 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 LINC00886-201ENST00000472943 3306 ntTSL 2 BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 FAM13A-212ENST00000508369 3169 ntTSL 5 BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 FLRT2-204ENST00000554746 3278 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 FBXW7-207ENST00000603841 2261 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 RPRD2-203ENST00000401000 7605 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 TRIM53AP-201ENST00000532014 1544 ntBASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 RBFOX1-202ENST00000340209 4099 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 MAT2B-202ENST00000321757 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 NR1I3-206ENST00000367984 1059 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 AC121338.1-201ENST00000380601 1287 ntTSL 2 BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 C2orf76-204ENST00000409877 950 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 Z98751.1-201ENST00000413827 381 ntBASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 CNOT4P1-201ENST00000417432 1199 ntBASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 AL365273.1-201ENST00000433113 587 ntTSL 2 BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 AL109754.1-201ENST00000449270 1036 ntTSL 2 BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 AL450023.2-201ENST00000453276 545 ntBASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 AC092042.1-201ENST00000457115 509 ntTSL 3 BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 SOX2-OT-202ENST00000461063 566 ntTSL 3 BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 CENPS-202ENST00000462462 584 ntTSL 3 BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 RN7SL461P-201ENST00000484915 282 ntBASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 NR1I3-219ENST00000504010 944 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 AC073648.1-201ENST00000508957 930 ntBASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 OR7E85P-201ENST00000512164 985 ntBASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 IGLV3-7-201ENST00000522952 271 ntBASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 AP001830.1-201ENST00000528717 692 ntTSL 2 BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 AP001767.3-201ENST00000533329 436 ntTSL 5 BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 UBBP4-201ENST00000583708 689 ntBASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 AC008622.1-201ENST00000597106 284 ntBASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 AC008013.3-201ENST00000605711 675 ntBASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 AC027176.3-201ENST00000624460 586 ntBASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 IRF1-201ENST00000245414 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 ETFB-202ENST00000354232 3551 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 CD59-202ENST00000395850 1889 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 KANK1-206ENST00000382303 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 FGL1-202ENST00000381841 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 TPP1-201ENST00000299427 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 LRTOMT-201ENST00000289488 2332 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 SV2C-202ENST00000502798 11035 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 ACSM6-202ENST00000341686 1712 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 PDIA6-203ENST00000404371 2682 ntTSL 2 BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 AC108463.3-201ENST00000603748 1482 ntBASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 OGDH-201ENST00000222673 4181 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 RPE-206ENST00000429921 2511 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 TEX2-201ENST00000258991 5232 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 SCN5A-210ENST00000455624 7170 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 LINC00933-201ENST00000557887 2606 ntTSL 2 BASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 AL133325.3-201ENST00000622757 3674 ntBASIC9.84□□□□□ -0.83
SYCE2Q6PIF2 ASB9-203ENST00000380488 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 HTR3B-202ENST00000537778 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 HHAT-207ENST00000541565 3164 ntTSL 2 BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 B3GALNT1-208ENST00000473285 2123 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 MEIS2-206ENST00000424352 2917 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 ACP6-205ENST00000583509 6923 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 TTPAL-201ENST00000262605 6212 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 LINC00298-201ENST00000426969 2236 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 AL049840.1-201ENST00000498989 1404 ntTSL 4 BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 TUFT1-203ENST00000368849 3111 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 CFLAR-215ENST00000457277 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 RBM22-201ENST00000199814 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 SART3-201ENST00000228284 4004 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 STAU1-207ENST00000371856 3684 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 CFAP161-201ENST00000286732 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 EFHC1-214ENST00000636107 3530 ntTSL 5 BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 AC090616.7-201ENST00000625123 2179 ntBASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 DDX11-202ENST00000350437 3724 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 TMED6-201ENST00000288025 938 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 TAS2R60-201ENST00000332690 957 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 WFDC3-203ENST00000372630 597 ntTSL 3 BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 RPL12P14-201ENST00000431782 490 ntBASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 LINC00358-201ENST00000432697 1276 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 AL445189.2-201ENST00000447543 259 ntBASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 ALG1L12P-201ENST00000515046 434 ntBASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 CHORDC1-207ENST00000530765 564 ntTSL 4 BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 AP003170.1-201ENST00000536944 1030 ntBASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 LINC02455-201ENST00000541881 496 ntTSL 3 BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 AP002383.5-201ENST00000542623 1161 ntBASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 IZUMO3-202ENST00000543880 1229 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 LINC02373-201ENST00000549261 423 ntTSL 3 BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 AL022318.2-201ENST00000558766 258 ntBASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 PLCB2-AS1-201ENST00000559520 568 ntTSL 3 BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 AC138512.1-201ENST00000563190 434 ntTSL 3 BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 SSH2-209ENST00000579954 428 ntTSL 3 BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 KIR3DP1-201ENST00000580853 628 ntBASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 AC004147.5-201ENST00000581727 536 ntBASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 Metazoa_SRP.58-201ENST00000618720 282 ntBASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 FP565260.4-201ENST00000624081 513 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 ADD3-AS1-203ENST00000625954 472 ntTSL 3 BASIC9.83□□□□□ -0.84
SYCE2Q6PIF2 CPSF7-226ENST00000626926 306 ntTSL 5 BASIC9.83□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms