Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MAPK10-325ENST00000641537 2623 ntBASIC9.93□□□□□ -0.82
LMO3Q8TAP4 AC002480.4-201ENST00000414116 2592 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 ZAN-206ENST00000618565 8651 ntAPPRIS P4 TSL 5 BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 SMG6-202ENST00000354901 3473 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 PCBP2-207ENST00000546463 1457 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 ZNF587P1-201ENST00000415378 1386 ntBASIC9.93□□□□□ -0.82
LMO3Q8TAP4 KIAA0391-205ENST00000603544 2232 ntTSL 5 BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 FLJ22447-202ENST00000556569 1312 ntTSL 2 BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 TNFAIP8-201ENST00000274456 795 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 ZNF626-201ENST00000291750 1123 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 LY6G6E-225ENST00000383418 383 ntAPPRIS P5 TSL 1 (best) BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 TPM3P6-201ENST00000391998 742 ntBASIC9.93□□□□□ -0.82
LMO3Q8TAP4 RNA5SP29-201ENST00000410988 106 ntBASIC9.93□□□□□ -0.82
LMO3Q8TAP4 AL389889.1-201ENST00000443747 566 ntTSL 4 BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 AL359979.1-201ENST00000446145 487 ntTSL 3 BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 AL355483.1-201ENST00000450469 237 ntTSL 3 BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 AC073551.1-201ENST00000450741 834 ntBASIC9.93□□□□□ -0.82
LMO3Q8TAP4 RPL7AP50-201ENST00000452821 795 ntBASIC9.93□□□□□ -0.82
LMO3Q8TAP4 RN7SL566P-201ENST00000467650 296 ntBASIC9.93□□□□□ -0.82
LMO3Q8TAP4 AF131215.1-201ENST00000488887 520 ntBASIC9.93□□□□□ -0.82
LMO3Q8TAP4 LINC00900-202ENST00000501294 982 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 AC010608.1-201ENST00000507964 275 ntTSL 4 BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 WBP1LP2-201ENST00000515260 998 ntBASIC9.93□□□□□ -0.82
LMO3Q8TAP4 AC084121.2-201ENST00000528788 264 ntBASIC9.93□□□□□ -0.82
LMO3Q8TAP4 AC087321.1-201ENST00000539105 460 ntTSL 3 BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 AC073612.1-201ENST00000548802 771 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 OR4K4P-201ENST00000556991 684 ntBASIC9.93□□□□□ -0.82
LMO3Q8TAP4 AC048337.1-201ENST00000557474 552 ntTSL 4 BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 ARPP19-203ENST00000561971 799 ntTSL 3 BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 AC022966.2-201ENST00000587434 367 ntBASIC9.93□□□□□ -0.82
LMO3Q8TAP4 AL365214.3-204ENST00000587816 894 ntAPPRIS P5 TSL 5 BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 AC018638.6-201ENST00000605007 1267 ntBASIC9.93□□□□□ -0.82
LMO3Q8TAP4 RN7SL673P-201ENST00000616262 237 ntBASIC9.93□□□□□ -0.82
LMO3Q8TAP4 RN7SL495P-201ENST00000616925 237 ntBASIC9.93□□□□□ -0.82
LMO3Q8TAP4 RN7SL650P-201ENST00000619902 299 ntBASIC9.93□□□□□ -0.82
LMO3Q8TAP4 RN7SL719P-201ENST00000620196 237 ntBASIC9.93□□□□□ -0.82
LMO3Q8TAP4 MIR6877-201ENST00000620452 64 ntBASIC9.93□□□□□ -0.82
LMO3Q8TAP4 RN7SL469P-201ENST00000621501 237 ntBASIC9.93□□□□□ -0.82
LMO3Q8TAP4 AL390726.6-203ENST00000636076 473 ntBASIC9.93□□□□□ -0.82
LMO3Q8TAP4 DMD-212ENST00000378723 4645 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 SCN5A-208ENST00000450102 6284 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 NTPCR-202ENST00000366628 6311 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 FAM161B-201ENST00000286544 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 KCNE1-201ENST00000337385 3347 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 NLRP1-216ENST00000617618 4788 ntAPPRIS P4 TSL 5 BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 TDG-202ENST00000392872 3251 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 ZNF80-202ENST00000482457 2471 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 ATP6V0D2-201ENST00000285393 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 MLH1-222ENST00000539477 2366 ntTSL 2 BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 AP000552.1-202ENST00000436681 3714 ntTSL 5 BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 ZNF157-201ENST00000377073 2318 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 DCAF8L2-202ENST00000451261 2295 ntAPPRIS P1 TSL 4 BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 AP002490.1-201ENST00000502284 4233 ntTSL 2 BASIC9.93□□□□□ -0.82
LMO3Q8TAP4 AC024610.2-205ENST00000584758 1567 ntTSL 5 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 ZNF561-201ENST00000302851 4693 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 OR3A4P-202ENST00000624752 1461 ntBASIC9.92□□□□□ -0.82
LMO3Q8TAP4 SEZ6L2-201ENST00000308713 3801 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 NDE1-201ENST00000396354 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 AC079174.2-201ENST00000611145 2028 ntBASIC9.92□□□□□ -0.82
LMO3Q8TAP4 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 LARS2-201ENST00000265537 4281 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 PRDM9-201ENST00000296682 3691 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 SP1-202ENST00000426431 7603 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 GABRB3-204ENST00000541819 5934 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 RCAN1-203ENST00000381135 2526 ntTSL 2 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 MAPK10-260ENST00000641047 2546 ntBASIC9.92□□□□□ -0.82
LMO3Q8TAP4 TMPRSS4-220ENST00000618855 3531 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 HTR4-202ENST00000362016 2979 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 SZT2-209ENST00000562955 13968 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 RAD17-219ENST00000521422 2323 ntTSL 5 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 SCGB2A1-201ENST00000244930 521 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 TRNT1-203ENST00000339437 976 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 SNORA71A-201ENST00000364729 134 ntBASIC9.92□□□□□ -0.82
LMO3Q8TAP4 FCRLA-207ENST00000367950 823 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 TRAV13-2-201ENST00000390439 410 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 PDGFC-202ENST00000422544 849 ntTSL 5 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 PFN1P1-201ENST00000442087 423 ntBASIC9.92□□□□□ -0.82
LMO3Q8TAP4 TCAIM-208ENST00000444602 1056 ntTSL 2 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 WWTR1-IT1-201ENST00000463167 451 ntTSL 5 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 MPTX1-201ENST00000480235 609 ntBASIC9.92□□□□□ -0.82
LMO3Q8TAP4 RPL29P11-201ENST00000494408 492 ntBASIC9.92□□□□□ -0.82
LMO3Q8TAP4 AC233724.16-201ENST00000510838 1201 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 AC103719.1-201ENST00000517994 581 ntTSL 4 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 IGLVI-38-201ENST00000519982 385 ntBASIC9.92□□□□□ -0.82
LMO3Q8TAP4 AC131025.1-201ENST00000521756 588 ntTSL 3 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 AC023194.3-201ENST00000522679 277 ntTSL 3 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 OR9G3P-201ENST00000525553 918 ntBASIC9.92□□□□□ -0.82
LMO3Q8TAP4 CASP1-204ENST00000525825 1237 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 AC018716.1-201ENST00000534604 561 ntTSL 4 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 ZNF826P-202ENST00000542380 1067 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 AC091132.5-201ENST00000590995 560 ntTSL 5 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 AC016629.3-201ENST00000596029 519 ntTSL 3 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 PCBP1-AS1-260ENST00000602091 959 ntTSL 5 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 AP003108.5-201ENST00000623008 895 ntBASIC9.92□□□□□ -0.82
LMO3Q8TAP4 BCAS3-233ENST00000626960 227 ntTSL 5 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 TANGO6-201ENST00000261778 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 SMIM7-208ENST00000487416 2776 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 ARHGEF9-225ENST00000636276 4097 ntTSL 5 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 GMPR2-203ENST00000399440 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 380.6 ms