Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AL591806.1-201ENST00000447167 1109 ntTSL 3 BASIC8.64□□□□□ -1.03
P04436 PRDX2P1-201ENST00000450181 589 ntBASIC8.64□□□□□ -1.03
P04436 RPPH1-3P-201ENST00000516541 322 ntBASIC8.64□□□□□ -1.03
P04436 AC131025.1-201ENST00000521756 588 ntTSL 3 BASIC8.64□□□□□ -1.03
P04436 AC010319.1-201ENST00000526892 1258 ntBASIC8.64□□□□□ -1.03
P04436 OR8B10P-201ENST00000529692 932 ntBASIC8.64□□□□□ -1.03
P04436 RAB6A-209ENST00000541973 1104 ntTSL 2 BASIC8.64□□□□□ -1.03
P04436 NR2F2-AS1-203ENST00000558929 574 ntTSL 5 BASIC8.64□□□□□ -1.03
P04436 AC016629.3-201ENST00000596029 519 ntTSL 3 BASIC8.64□□□□□ -1.03
P04436 CEACAM5-209ENST00000616453 1160 ntTSL 5 BASIC8.64□□□□□ -1.03
P04436 Metazoa_SRP.60-201ENST00000616888 305 ntBASIC8.64□□□□□ -1.03
P04436 AC005796.1-201ENST00000623214 433 ntBASIC8.64□□□□□ -1.03
P04436 AL358790.1-202ENST00000632794 583 ntTSL 5 BASIC8.64□□□□□ -1.03
P04436 FAM238A-202ENST00000637359 442 ntBASIC8.64□□□□□ -1.03
P04436 ZNF304-201ENST00000282286 4202 ntAPPRIS P3 TSL 2 BASIC8.64□□□□□ -1.03
P04436 SLC38A4-202ENST00000447411 3791 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
P04436 ZHX3-214ENST00000559234 6296 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
P04436 FGD3-201ENST00000337352 3303 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
P04436 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
P04436 ACSM5P1-201ENST00000566754 2438 ntBASIC8.64□□□□□ -1.03
P04436 AP003469.4-201ENST00000565617 2825 ntBASIC8.64□□□□□ -1.03
P04436 GANAB-202ENST00000356638 3608 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
P04436 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
P04436 ARMC4-201ENST00000305242 3572 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
P04436 PDIA6-203ENST00000404371 2682 ntTSL 2 BASIC8.64□□□□□ -1.03
P04436 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
P04436 CCDC36-201ENST00000296449 2613 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
P04436 ATP6V1C1-201ENST00000395862 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
P04436 NLRP1-210ENST00000572272 4422 ntAPPRIS P4 TSL 1 (best) BASIC8.64□□□□□ -1.03
P04436 INTS4-206ENST00000529807 1845 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
P04436 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
P04436 MRPS33-201ENST00000324787 4241 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
P04436 LRRC2-202ENST00000395905 5100 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
P04436 BPNT1-203ENST00000414869 2357 ntTSL 2 BASIC8.63□□□□□ -1.03
P04436 CEP70-210ENST00000481834 2037 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
P04436 MDH1-201ENST00000233114 1650 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
P04436 APOL2-201ENST00000249066 2685 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
P04436 LMO7-201ENST00000321797 5647 ntTSL 5 BASIC8.63□□□□□ -1.03
P04436 WBP11P1-202ENST00000567636 2972 ntBASIC8.63□□□□□ -1.03
P04436 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
P04436 NFYC-213ENST00000447388 1950 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
P04436 LINC02006-202ENST00000492569 1958 ntTSL 2 BASIC8.63□□□□□ -1.03
P04436 TUBAP2-201ENST00000530835 1613 ntBASIC8.63□□□□□ -1.03
P04436 CDH26-201ENST00000244049 1931 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
P04436 GNGT1-205ENST00000455502 1943 ntTSL 2 BASIC8.63□□□□□ -1.03
P04436 WISP3-201ENST00000230529 1235 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
P04436 APOBEC2-201ENST00000244669 1151 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
P04436 HIST1H2AA-201ENST00000297012 396 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
P04436 KRTAP22-1-201ENST00000334680 296 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
P04436 GLYATL3-201ENST00000371197 1113 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
P04436 BPHL-202ENST00000380375 1050 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
P04436 BZW2-203ENST00000407633 898 ntTSL 3 BASIC8.63□□□□□ -1.03
P04436 ERICH2-201ENST00000409885 601 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
P04436 RPS5P2-201ENST00000415238 640 ntBASIC8.63□□□□□ -1.03
P04436 LINC01238-201ENST00000416204 590 ntTSL 2 BASIC8.63□□□□□ -1.03
P04436 HNRNPA1P70-201ENST00000420836 1087 ntBASIC8.63□□□□□ -1.03
P04436 AC073188.2-201ENST00000424036 701 ntTSL 5 BASIC8.63□□□□□ -1.03
P04436 AL136529.1-201ENST00000430540 610 ntTSL 3 BASIC8.63□□□□□ -1.03
P04436 AL139327.3-201ENST00000433721 379 ntBASIC8.63□□□□□ -1.03
P04436 RPL17P1-201ENST00000445304 536 ntBASIC8.63□□□□□ -1.03
P04436 AC093582.1-201ENST00000447086 385 ntBASIC8.63□□□□□ -1.03
P04436 AL672142.1-201ENST00000482796 378 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
P04436 FAM107B-228ENST00000496330 697 ntAPPRIS P1 TSL 4 BASIC8.63□□□□□ -1.03
P04436 AC096759.2-202ENST00000515230 777 ntTSL 3 BASIC8.63□□□□□ -1.03
P04436 AC024451.3-201ENST00000517810 463 ntBASIC8.63□□□□□ -1.03
P04436 AC109466.1-206ENST00000522686 774 ntTSL 5 BASIC8.63□□□□□ -1.03
P04436 AC034102.7-201ENST00000550840 470 ntTSL 5 BASIC8.63□□□□□ -1.03
P04436 AL359792.1-201ENST00000554046 385 ntTSL 3 BASIC8.63□□□□□ -1.03
P04436 AC015871.1-201ENST00000557880 1081 ntBASIC8.63□□□□□ -1.03
P04436 KRT18P47-201ENST00000561341 977 ntBASIC8.63□□□□□ -1.03
P04436 TMEM170A-204ENST00000567796 734 ntTSL 5 BASIC8.63□□□□□ -1.03
P04436 LINC01764-202ENST00000589310 441 ntTSL 3 BASIC8.63□□□□□ -1.03
P04436 ACTG1P22-202ENST00000605503 859 ntTSL 4 BASIC8.63□□□□□ -1.03
P04436 AC002470.1-201ENST00000610278 395 ntBASIC8.63□□□□□ -1.03
P04436 Metazoa_SRP.140-201ENST00000613842 252 ntBASIC8.63□□□□□ -1.03
P04436 AL390726.6-203ENST00000636076 473 ntBASIC8.63□□□□□ -1.03
P04436 AC104472.1-201ENST00000399242 1585 ntBASIC8.63□□□□□ -1.03
P04436 AC112206.2-203ENST00000513234 1556 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
P04436 SCNN1B-208ENST00000568923 1852 ntTSL 3 BASIC8.63□□□□□ -1.03
P04436 ANAPC16-204ENST00000615507 3100 ntTSL 3 BASIC8.63□□□□□ -1.03
P04436 BPNT1-201ENST00000322067 2465 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
P04436 TMEM231-201ENST00000258173 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
P04436 RFX3-201ENST00000302303 1522 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
P04436 NDP-201ENST00000378062 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
P04436 SMPD4P1-203ENST00000443839 2108 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
P04436 NPAP1P4-201ENST00000443325 3310 ntBASIC8.63□□□□□ -1.03
P04436 RNF40-202ENST00000357890 3917 ntTSL 2 BASIC8.63□□□□□ -1.03
P04436 GHR-212ENST00000620156 4529 ntTSL 5 BASIC8.63□□□□□ -1.03
P04436 ZNF286B-201ENST00000285274 5145 ntTSL 3 BASIC8.63□□□□□ -1.03
P04436 MYBPC2-201ENST00000357701 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
P04436 PTGES3L-201ENST00000409446 1781 ntTSL 2 BASIC8.63□□□□□ -1.03
P04436 AP000265.1-201ENST00000565959 1782 ntBASIC8.63□□□□□ -1.03
P04436 RBMS2-207ENST00000552247 1471 ntTSL 5 BASIC8.63□□□□□ -1.03
P04436 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC8.63□□□□□ -1.03
P04436 LMX1A-201ENST00000294816 3350 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
P04436 RUBCN-201ENST00000273582 6955 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
P04436 LINC00402-201ENST00000419499 3340 ntTSL 2 BASIC8.62□□□□□ -1.03
P04436 LINC01531-202ENST00000536898 3312 ntTSL 2 BASIC8.62□□□□□ -1.03
P04436 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC8.62□□□□□ -1.03
P04436 HNRNPA1L2-201ENST00000357495 3011 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms