RNA–Protein interactions for RNA: ENST00000273582.9

RUBCN-201, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RUBCN, Length 6,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-201ENST00000273582 NISCHQ9Y2I1 1504 aa19.91■□□□□ 0.78
RUBCN-201ENST00000273582 ZCCHC6Q5VYS8 1495 aaKnown RBP16.87■□□□□ 0.29
RUBCN-201ENST00000273582 DCAF1Q9Y4B6 1507 aa16.8■□□□□ 0.28
RUBCN-201ENST00000273582 CCDC180Q9P1Z9 1646 aa16.71■□□□□ 0.27
RUBCN-201ENST00000273582 MYO15BQ96JP2 1530 aa16.5■□□□□ 0.23
RUBCN-201ENST00000273582 SUPT5HO00267 1087 aaKnown RBP16.37■□□□□ 0.21
RUBCN-201ENST00000273582 CHIC1Q5VXU3 224 aa16.31■□□□□ 0.2
RUBCN-201ENST00000273582 SHROOM4Q9ULL8 1493 aa16.26■□□□□ 0.19
RUBCN-201ENST00000273582 DCAF8L2P0C7V8 631 aa16.07■□□□□ 0.16
RUBCN-201ENST00000273582 HRCP23327 699 aa15.86■□□□□ 0.13
RUBCN-201ENST00000273582 RSF1Q96T23 1441 aaPredicted RBP15.8■□□□□ 0.12
RUBCN-201ENST00000273582 NACADO15069 1562 aa15.74■□□□□ 0.11
RUBCN-201ENST00000273582 ZEB1P37275 1124 aaPredicted RBP15.71■□□□□ 0.11
RUBCN-201ENST00000273582 ABCC9O60706 1549 aa15.68■□□□□ 0.1
RUBCN-201ENST00000273582 TRIM26Q12899 539 aaPredicted RBP15.6■□□□□ 0.09
RUBCN-201ENST00000273582 TRIM41Q8WV44 630 aa15.58■□□□□ 0.08
RUBCN-201ENST00000273582 EEA1Q15075 1411 aa15.5■□□□□ 0.07
RUBCN-201ENST00000273582 RB1CC1Q8TDY2 1594 aa15.48■□□□□ 0.07
RUBCN-201ENST00000273582 PCGF6Q9BYE7 350 aa15.46■□□□□ 0.06
RUBCN-201ENST00000273582 BAZ1AQ9NRL2 1556 aaPredicted RBP15.41■□□□□ 0.06
RUBCN-201ENST00000273582 CECR2Q9BXF3 1484 aa15.26■□□□□ 0.03
RUBCN-201ENST00000273582 LOC105371045A0A1W2PR82 267 aa15.25■□□□□ 0.03
RUBCN-201ENST00000273582 WRNQ14191 1432 aaPredicted RBP eCLIP15.24■□□□□ 0.03
RUBCN-201ENST00000273582 MROH2BQ7Z745 1585 aa15.19■□□□□ 0.02
RUBCN-201ENST00000273582 SCRIBQ14160 1630 aa15.18■□□□□ 0.02
RUBCN-201ENST00000273582 TNIKQ9UKE5 1360 aa15.15■□□□□ 0.02
RUBCN-201ENST00000273582 CSRNP3Q8WYN3 585 aa15.14■□□□□ 0.01
RUBCN-201ENST00000273582 PELP1Q8IZL8 1130 aaKnown RBP15.08■□□□□ 0
RUBCN-201ENST00000273582 TOP2AP11388 1531 aaKnown RBP15.04■□□□□ -0
RUBCN-201ENST00000273582 CLSPNQ9HAW4 1339 aa14.97□□□□□ -0.01
RUBCN-201ENST00000273582 FAM9AQ8IZU1 332 aaPredicted RBP14.95□□□□□ -0.02
RUBCN-201ENST00000273582 PEG3Q9GZU2 1588 aa14.95□□□□□ -0.02
RUBCN-201ENST00000273582 CEP164Q9UPV0 1460 aa14.89□□□□□ -0.03
RUBCN-201ENST00000273582 GOLGA3Q08378 1498 aa14.88□□□□□ -0.03
RUBCN-201ENST00000273582 CCDC88BA6NC98 1476 aa14.87□□□□□ -0.03
RUBCN-201ENST00000273582 CEP162Q5TB80 1403 aa14.86□□□□□ -0.03
RUBCN-201ENST00000273582 SMARCA4P51532 1647 aa14.82□□□□□ -0.04
RUBCN-201ENST00000273582 BAZ1BQ9UIG0 1483 aaKnown RBP14.8□□□□□ -0.04
RUBCN-201ENST00000273582 EIF4G1Q04637 1599 aaKnown RBP14.8□□□□□ -0.04
RUBCN-201ENST00000273582 ATAD2BQ9ULI0 1458 aa14.8□□□□□ -0.04
RUBCN-201ENST00000273582 SMARCA2P51531 1590 aa14.79□□□□□ -0.04
RUBCN-201ENST00000273582 NCAPD3P42695 1498 aa14.79□□□□□ -0.04
RUBCN-201ENST00000273582 APLP2Q06481 763 aa14.79□□□□□ -0.04
RUBCN-201ENST00000273582 VPS8Q8N3P4 1428 aa14.77□□□□□ -0.04
RUBCN-201ENST00000273582 UBTFP17480 764 aaKnown RBP14.76□□□□□ -0.05
RUBCN-201ENST00000273582 CENPBP07199 599 aaPredicted RBP14.74□□□□□ -0.05
RUBCN-201ENST00000273582 CLIP1P30622 1438 aa14.73□□□□□ -0.05
RUBCN-201ENST00000273582 PPARGC1BQ86YN6 1023 aaKnown RBP14.73□□□□□ -0.05
RUBCN-201ENST00000273582 CCER1Q8TC90 406 aaPredicted RBP14.73□□□□□ -0.05
RUBCN-201ENST00000273582 EHMT2Q96KQ7 1210 aa14.69□□□□□ -0.06
RUBCN-201ENST00000273582 SOGA1O94964 1423 aa14.66□□□□□ -0.06
RUBCN-201ENST00000273582 TIMELESSQ9UNS1 1208 aa14.63□□□□□ -0.07
RUBCN-201ENST00000273582 PRXQ9BXM0 1461 aa14.62□□□□□ -0.07
RUBCN-201ENST00000273582 ERICH6Q7L0X2 663 aa14.62□□□□□ -0.07
RUBCN-201ENST00000273582 WIZO95785 1651 aa14.62□□□□□ -0.07
RUBCN-201ENST00000273582 KIF27Q86VH2 1401 aa14.6□□□□□ -0.07
RUBCN-201ENST00000273582 HMGXB3Q12766 1538 aa14.6□□□□□ -0.07
RUBCN-201ENST00000273582 BICRAQ9NZM4 1560 aa14.57□□□□□ -0.08
RUBCN-201ENST00000273582 ERICH3Q5RHP9 1530 aa14.56□□□□□ -0.08
RUBCN-201ENST00000273582 ACIN1Q9UKV3 1341 aaKnown RBP14.54□□□□□ -0.08
RUBCN-201ENST00000273582 ZNF316A6NFI3 1004 aaPredicted RBP14.53□□□□□ -0.08
RUBCN-201ENST00000273582 KIF21BO75037 1637 aa14.53□□□□□ -0.08
RUBCN-201ENST00000273582 CFTRP13569 1480 aa14.52□□□□□ -0.08
RUBCN-201ENST00000273582 PABPN1Q86U42 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
RUBCN-201ENST00000273582 DIEXFQ68CQ4 756 aaKnown RBP14.48□□□□□ -0.09
RUBCN-201ENST00000273582 MYT1Q01538 1121 aa14.47□□□□□ -0.09
RUBCN-201ENST00000273582 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.47□□□□□ -0.09
RUBCN-201ENST00000273582 CADPSQ9ULU8 1353 aa14.45□□□□□ -0.1
RUBCN-201ENST00000273582 MAP3K1Q13233 1512 aa14.44□□□□□ -0.1
RUBCN-201ENST00000273582 ABCC8Q09428 1581 aa14.41□□□□□ -0.1
RUBCN-201ENST00000273582 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.4□□□□□ -0.1
RUBCN-201ENST00000273582 FHAD1B1AJZ9 1412 aa14.4□□□□□ -0.1
RUBCN-201ENST00000273582 CUX2O14529 1486 aa14.37□□□□□ -0.11
RUBCN-201ENST00000273582 RRBP1Q9P2E9 1410 aaKnown RBP14.36□□□□□ -0.11
RUBCN-201ENST00000273582 TOP2BQ02880 1626 aa14.35□□□□□ -0.11
RUBCN-201ENST00000273582 RUSC2Q8N2Y8 1516 aa14.34□□□□□ -0.11
RUBCN-201ENST00000273582 RAPGEF2Q9Y4G8 1499 aa14.34□□□□□ -0.11
RUBCN-201ENST00000273582 IGF1RP08069 1367 aa14.32□□□□□ -0.12
RUBCN-201ENST00000273582 CCNB3Q8WWL7 1395 aa14.31□□□□□ -0.12
RUBCN-201ENST00000273582 SYNJ1O43426 1573 aa14.28□□□□□ -0.12
RUBCN-201ENST00000273582 TTBK1Q5TCY1 1321 aaPredicted RBP14.26□□□□□ -0.13
RUBCN-201ENST00000273582 CARMIL1Q5VZK9 1371 aa14.26□□□□□ -0.13
RUBCN-201ENST00000273582 DHX57Q6P158 1386 aaKnown RBP14.24□□□□□ -0.13
RUBCN-201ENST00000273582 HNRNPUL2Q1KMD3 747 aaKnown RBP14.22□□□□□ -0.13
RUBCN-201ENST00000273582 ARAP1Q96P48 1450 aa14.18□□□□□ -0.14
RUBCN-201ENST00000273582 FMN1Q68DA7 1419 aa14.18□□□□□ -0.14
RUBCN-201ENST00000273582 AQRO60306 1485 aaKnown RBP eCLIP14.18□□□□□ -0.144e-6■■■■□ 19.9
RUBCN-201ENST00000273582 SCAF1Q9H7N4 1312 aaKnown RBP14.18□□□□□ -0.14
RUBCN-201ENST00000273582 NEUROD1Q13562 356 aa14.17□□□□□ -0.14
RUBCN-201ENST00000273582 BIVM-ERCC5R4GMW8 1640 aa14.13□□□□□ -0.15
RUBCN-201ENST00000273582 YTHDC1Q96MU7 727 aaKnown RBP14.13□□□□□ -0.15
RUBCN-201ENST00000273582 ARHGAP35Q9NRY4 1499 aa14.12□□□□□ -0.15
RUBCN-201ENST00000273582 ABCA10Q8WWZ4 1543 aa14.11□□□□□ -0.15
RUBCN-201ENST00000273582 AKNAQ7Z591 1439 aa14.09□□□□□ -0.15
RUBCN-201ENST00000273582 EFCAB5A4FU69 1503 aa14.08□□□□□ -0.15
RUBCN-201ENST00000273582 CUX1P39880 1505 aa14.08□□□□□ -0.16
RUBCN-201ENST00000273582 NEFLP07196 543 aa14.06□□□□□ -0.16
RUBCN-201ENST00000273582 SETD5Q9C0A6 1442 aa14.06□□□□□ -0.16
RUBCN-201ENST00000273582 KANK4Q5T7N3 995 aaPredicted RBP14.05□□□□□ -0.16
RUBCN-201ENST00000273582 CASKIN1Q8WXD9 1431 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms