Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.54
DDX49Q9Y6V7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
DDX49Q9Y6V7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.64■■□□□ 1.54
DDX49Q9Y6V7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
DDX49Q9Y6V7 AC005224.4-201ENST00000583262 1652 ntBASIC24.64■■□□□ 1.53
DDX49Q9Y6V7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
DDX49Q9Y6V7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
DDX49Q9Y6V7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
DDX49Q9Y6V7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC24.64■■□□□ 1.53
DDX49Q9Y6V7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.64■■□□□ 1.53
DDX49Q9Y6V7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC24.64■■□□□ 1.53
DDX49Q9Y6V7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
DDX49Q9Y6V7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX49Q9Y6V7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX49Q9Y6V7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC24.63■■□□□ 1.53
DDX49Q9Y6V7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
DDX49Q9Y6V7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX49Q9Y6V7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
DDX49Q9Y6V7 CROCCP5-201ENST00000436658 830 ntBASIC24.63■■□□□ 1.53
DDX49Q9Y6V7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
DDX49Q9Y6V7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC24.63■■□□□ 1.53
DDX49Q9Y6V7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC24.63■■□□□ 1.53
DDX49Q9Y6V7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX49Q9Y6V7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
DDX49Q9Y6V7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX49Q9Y6V7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
DDX49Q9Y6V7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
DDX49Q9Y6V7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX49Q9Y6V7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
DDX49Q9Y6V7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
DDX49Q9Y6V7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
DDX49Q9Y6V7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC24.62■■□□□ 1.53
DDX49Q9Y6V7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.62■■□□□ 1.53
DDX49Q9Y6V7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
DDX49Q9Y6V7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.62■■□□□ 1.53
DDX49Q9Y6V7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC24.62■■□□□ 1.53
DDX49Q9Y6V7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
DDX49Q9Y6V7 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.62■■□□□ 1.53
DDX49Q9Y6V7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC24.62■■□□□ 1.53
DDX49Q9Y6V7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.62■■□□□ 1.53
DDX49Q9Y6V7 BID-214ENST00000617586 542 ntTSL 5 BASIC24.62■■□□□ 1.53
DDX49Q9Y6V7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC24.62■■□□□ 1.53
DDX49Q9Y6V7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC24.62■■□□□ 1.53
DDX49Q9Y6V7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
DDX49Q9Y6V7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
DDX49Q9Y6V7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
DDX49Q9Y6V7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
DDX49Q9Y6V7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
DDX49Q9Y6V7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX49Q9Y6V7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX49Q9Y6V7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX49Q9Y6V7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX49Q9Y6V7 AC104187.1-201ENST00000607510 612 ntBASIC24.61■■□□□ 1.53
DDX49Q9Y6V7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.61■■□□□ 1.53
DDX49Q9Y6V7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
DDX49Q9Y6V7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX49Q9Y6V7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC24.61■■□□□ 1.53
DDX49Q9Y6V7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC24.61■■□□□ 1.53
DDX49Q9Y6V7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX49Q9Y6V7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX49Q9Y6V7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX49Q9Y6V7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX49Q9Y6V7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX49Q9Y6V7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.6■■□□□ 1.53
DDX49Q9Y6V7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
DDX49Q9Y6V7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX49Q9Y6V7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX49Q9Y6V7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
DDX49Q9Y6V7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX49Q9Y6V7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX49Q9Y6V7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX49Q9Y6V7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DDX49Q9Y6V7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC24.59■■□□□ 1.53
DDX49Q9Y6V7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC24.59■■□□□ 1.53
DDX49Q9Y6V7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
DDX49Q9Y6V7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
DDX49Q9Y6V7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DDX49Q9Y6V7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
DDX49Q9Y6V7 KRT19P1-201ENST00000405746 1186 ntBASIC24.59■■□□□ 1.53
DDX49Q9Y6V7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
DDX49Q9Y6V7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
DDX49Q9Y6V7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
DDX49Q9Y6V7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DDX49Q9Y6V7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DDX49Q9Y6V7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC24.59■■□□□ 1.53
DDX49Q9Y6V7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC24.59■■□□□ 1.53
DDX49Q9Y6V7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
DDX49Q9Y6V7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC24.58■■□□□ 1.53
DDX49Q9Y6V7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.58■■□□□ 1.53
DDX49Q9Y6V7 AL049796.1-201ENST00000565336 1766 ntBASIC24.58■■□□□ 1.53
DDX49Q9Y6V7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.58■■□□□ 1.53
DDX49Q9Y6V7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
DDX49Q9Y6V7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC24.58■■□□□ 1.53
DDX49Q9Y6V7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
DDX49Q9Y6V7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
DDX49Q9Y6V7 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.58■■□□□ 1.53
DDX49Q9Y6V7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
DDX49Q9Y6V7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.58■■□□□ 1.53
DDX49Q9Y6V7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
DDX49Q9Y6V7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 1137 ms