Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
HS3ST4Q9Y661 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
HS3ST4Q9Y661 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.27■■□□□ 1
HS3ST4Q9Y661 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.27■■□□□ 1
HS3ST4Q9Y661 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
HS3ST4Q9Y661 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.27■■□□□ 1
HS3ST4Q9Y661 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.27■■□□□ 1
HS3ST4Q9Y661 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
HS3ST4Q9Y661 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.27■■□□□ 1
HS3ST4Q9Y661 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.27■■□□□ 1
HS3ST4Q9Y661 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
HS3ST4Q9Y661 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.27■■□□□ 1
HS3ST4Q9Y661 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HS3ST4Q9Y661 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HS3ST4Q9Y661 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HS3ST4Q9Y661 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HS3ST4Q9Y661 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HS3ST4Q9Y661 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
HS3ST4Q9Y661 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.26■□□□□ 0.99
HS3ST4Q9Y661 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HS3ST4Q9Y661 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.26■□□□□ 0.99
HS3ST4Q9Y661 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
HS3ST4Q9Y661 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HS3ST4Q9Y661 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HS3ST4Q9Y661 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HS3ST4Q9Y661 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HS3ST4Q9Y661 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.26■□□□□ 0.99
HS3ST4Q9Y661 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.26■□□□□ 0.99
HS3ST4Q9Y661 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.26■□□□□ 0.99
HS3ST4Q9Y661 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HS3ST4Q9Y661 CLDN5-201ENST00000403084 2357 ntBASIC21.26■□□□□ 0.99
HS3ST4Q9Y661 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
HS3ST4Q9Y661 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
HS3ST4Q9Y661 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.26■□□□□ 0.99
HS3ST4Q9Y661 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
HS3ST4Q9Y661 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
HS3ST4Q9Y661 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HS3ST4Q9Y661 MKRN4P-201ENST00000444706 1521 ntBASIC21.25■□□□□ 0.99
HS3ST4Q9Y661 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HS3ST4Q9Y661 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HS3ST4Q9Y661 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
HS3ST4Q9Y661 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.25■□□□□ 0.99
HS3ST4Q9Y661 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.25■□□□□ 0.99
HS3ST4Q9Y661 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
HS3ST4Q9Y661 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.25■□□□□ 0.99
HS3ST4Q9Y661 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
HS3ST4Q9Y661 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.25■□□□□ 0.99
HS3ST4Q9Y661 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HS3ST4Q9Y661 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.25■□□□□ 0.99
HS3ST4Q9Y661 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.25■□□□□ 0.99
HS3ST4Q9Y661 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HS3ST4Q9Y661 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
HS3ST4Q9Y661 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
HS3ST4Q9Y661 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HS3ST4Q9Y661 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.24■□□□□ 0.99
HS3ST4Q9Y661 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HS3ST4Q9Y661 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.24■□□□□ 0.99
HS3ST4Q9Y661 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.24■□□□□ 0.99
HS3ST4Q9Y661 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
HS3ST4Q9Y661 AC100791.3-201ENST00000617619 330 ntBASIC21.24■□□□□ 0.99
HS3ST4Q9Y661 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HS3ST4Q9Y661 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.24■□□□□ 0.99
HS3ST4Q9Y661 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
HS3ST4Q9Y661 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.24■□□□□ 0.99
HS3ST4Q9Y661 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.24■□□□□ 0.99
HS3ST4Q9Y661 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HS3ST4Q9Y661 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HS3ST4Q9Y661 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.24■□□□□ 0.99
HS3ST4Q9Y661 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
HS3ST4Q9Y661 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
HS3ST4Q9Y661 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
HS3ST4Q9Y661 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
HS3ST4Q9Y661 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
HS3ST4Q9Y661 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HS3ST4Q9Y661 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.23■□□□□ 0.99
HS3ST4Q9Y661 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
HS3ST4Q9Y661 AL355472.2-201ENST00000422958 438 ntBASIC21.23■□□□□ 0.99
HS3ST4Q9Y661 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
HS3ST4Q9Y661 CYP21A1P-202ENST00000354927 1481 ntBASIC21.23■□□□□ 0.99
HS3ST4Q9Y661 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HS3ST4Q9Y661 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HS3ST4Q9Y661 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HS3ST4Q9Y661 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.23■□□□□ 0.99
HS3ST4Q9Y661 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.23■□□□□ 0.99
HS3ST4Q9Y661 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HS3ST4Q9Y661 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.22■□□□□ 0.99
HS3ST4Q9Y661 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HS3ST4Q9Y661 SLC29A4P1-201ENST00000398760 971 ntBASIC21.22■□□□□ 0.99
HS3ST4Q9Y661 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.22■□□□□ 0.99
HS3ST4Q9Y661 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HS3ST4Q9Y661 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.22■□□□□ 0.99
HS3ST4Q9Y661 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.22■□□□□ 0.99
HS3ST4Q9Y661 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.22■□□□□ 0.99
HS3ST4Q9Y661 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.22■□□□□ 0.99
HS3ST4Q9Y661 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.22■□□□□ 0.99
HS3ST4Q9Y661 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
HS3ST4Q9Y661 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HS3ST4Q9Y661 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HS3ST4Q9Y661 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HS3ST4Q9Y661 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms