Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
AP4S1Q9Y587 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
AP4S1Q9Y587 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP4S1Q9Y587 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
AP4S1Q9Y587 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP4S1Q9Y587 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP4S1Q9Y587 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP4S1Q9Y587 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP4S1Q9Y587 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.47■□□□□ 0.71
AP4S1Q9Y587 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
AP4S1Q9Y587 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP4S1Q9Y587 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP4S1Q9Y587 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP4S1Q9Y587 TCF3P1-201ENST00000423021 1937 ntBASIC19.47■□□□□ 0.71
AP4S1Q9Y587 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
AP4S1Q9Y587 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.47■□□□□ 0.71
AP4S1Q9Y587 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP4S1Q9Y587 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AP4S1Q9Y587 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AP4S1Q9Y587 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4S1Q9Y587 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AP4S1Q9Y587 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
AP4S1Q9Y587 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
AP4S1Q9Y587 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4S1Q9Y587 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4S1Q9Y587 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4S1Q9Y587 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4S1Q9Y587 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.46■□□□□ 0.71
AP4S1Q9Y587 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
AP4S1Q9Y587 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.46■□□□□ 0.71
AP4S1Q9Y587 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
AP4S1Q9Y587 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4S1Q9Y587 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4S1Q9Y587 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4S1Q9Y587 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AP4S1Q9Y587 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
AP4S1Q9Y587 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
AP4S1Q9Y587 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
AP4S1Q9Y587 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4S1Q9Y587 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4S1Q9Y587 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.45■□□□□ 0.7
AP4S1Q9Y587 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
AP4S1Q9Y587 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4S1Q9Y587 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
AP4S1Q9Y587 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4S1Q9Y587 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4S1Q9Y587 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.45■□□□□ 0.7
AP4S1Q9Y587 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4S1Q9Y587 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
AP4S1Q9Y587 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4S1Q9Y587 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
AP4S1Q9Y587 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4S1Q9Y587 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4S1Q9Y587 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4S1Q9Y587 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.44■□□□□ 0.7
AP4S1Q9Y587 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4S1Q9Y587 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4S1Q9Y587 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4S1Q9Y587 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
AP4S1Q9Y587 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4S1Q9Y587 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4S1Q9Y587 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
AP4S1Q9Y587 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AP4S1Q9Y587 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.44■□□□□ 0.7
AP4S1Q9Y587 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
AP4S1Q9Y587 AC010997.5-201ENST00000609182 354 ntBASIC19.44■□□□□ 0.7
AP4S1Q9Y587 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
AP4S1Q9Y587 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
AP4S1Q9Y587 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
AP4S1Q9Y587 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.44■□□□□ 0.7
AP4S1Q9Y587 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AP4S1Q9Y587 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
AP4S1Q9Y587 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4S1Q9Y587 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4S1Q9Y587 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4S1Q9Y587 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4S1Q9Y587 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.43■□□□□ 0.7
AP4S1Q9Y587 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.43■□□□□ 0.7
AP4S1Q9Y587 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.43■□□□□ 0.7
AP4S1Q9Y587 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
AP4S1Q9Y587 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4S1Q9Y587 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AP4S1Q9Y587 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4S1Q9Y587 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AP4S1Q9Y587 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4S1Q9Y587 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.43■□□□□ 0.7
AP4S1Q9Y587 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
AP4S1Q9Y587 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP4S1Q9Y587 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP4S1Q9Y587 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP4S1Q9Y587 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP4S1Q9Y587 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP4S1Q9Y587 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP4S1Q9Y587 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP4S1Q9Y587 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP4S1Q9Y587 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
AP4S1Q9Y587 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.42■□□□□ 0.7
AP4S1Q9Y587 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP4S1Q9Y587 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP4S1Q9Y587 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms