Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
YIPF1Q9Y548 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.63■■□□□ 1.05
YIPF1Q9Y548 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
YIPF1Q9Y548 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
YIPF1Q9Y548 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
YIPF1Q9Y548 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
YIPF1Q9Y548 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
YIPF1Q9Y548 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
YIPF1Q9Y548 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
YIPF1Q9Y548 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
YIPF1Q9Y548 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.63■■□□□ 1.05
YIPF1Q9Y548 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.63■■□□□ 1.05
YIPF1Q9Y548 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
YIPF1Q9Y548 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
YIPF1Q9Y548 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
YIPF1Q9Y548 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
YIPF1Q9Y548 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
YIPF1Q9Y548 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
YIPF1Q9Y548 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
YIPF1Q9Y548 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.62■■□□□ 1.05
YIPF1Q9Y548 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
YIPF1Q9Y548 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
YIPF1Q9Y548 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
YIPF1Q9Y548 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
YIPF1Q9Y548 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.62■■□□□ 1.05
YIPF1Q9Y548 AL158047.1-201ENST00000445918 881 ntBASIC21.62■■□□□ 1.05
YIPF1Q9Y548 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.62■■□□□ 1.05
YIPF1Q9Y548 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
YIPF1Q9Y548 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.62■■□□□ 1.05
YIPF1Q9Y548 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
YIPF1Q9Y548 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
YIPF1Q9Y548 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
YIPF1Q9Y548 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.62■■□□□ 1.05
YIPF1Q9Y548 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
YIPF1Q9Y548 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.61■■□□□ 1.05
YIPF1Q9Y548 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
YIPF1Q9Y548 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
YIPF1Q9Y548 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.61■■□□□ 1.05
YIPF1Q9Y548 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.61■■□□□ 1.05
YIPF1Q9Y548 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
YIPF1Q9Y548 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
YIPF1Q9Y548 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.61■■□□□ 1.05
YIPF1Q9Y548 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
YIPF1Q9Y548 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.61■■□□□ 1.05
YIPF1Q9Y548 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
YIPF1Q9Y548 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
YIPF1Q9Y548 AC142381.4-202ENST00000563973 229 ntBASIC21.61■■□□□ 1.05
YIPF1Q9Y548 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
YIPF1Q9Y548 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
YIPF1Q9Y548 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
YIPF1Q9Y548 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
YIPF1Q9Y548 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
YIPF1Q9Y548 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.6■■□□□ 1.05
YIPF1Q9Y548 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
YIPF1Q9Y548 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.6■■□□□ 1.05
YIPF1Q9Y548 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
YIPF1Q9Y548 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.6■■□□□ 1.05
YIPF1Q9Y548 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
YIPF1Q9Y548 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
YIPF1Q9Y548 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
YIPF1Q9Y548 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.6■■□□□ 1.05
YIPF1Q9Y548 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.6■■□□□ 1.05
YIPF1Q9Y548 UNC93B4-201ENST00000505679 747 ntBASIC21.6■■□□□ 1.05
YIPF1Q9Y548 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
YIPF1Q9Y548 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.6■■□□□ 1.05
YIPF1Q9Y548 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.6■■□□□ 1.05
YIPF1Q9Y548 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
YIPF1Q9Y548 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
YIPF1Q9Y548 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
YIPF1Q9Y548 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
YIPF1Q9Y548 AL117328.2-201ENST00000624617 1940 ntBASIC21.59■■□□□ 1.05
YIPF1Q9Y548 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
YIPF1Q9Y548 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
YIPF1Q9Y548 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
YIPF1Q9Y548 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
YIPF1Q9Y548 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.59■■□□□ 1.05
YIPF1Q9Y548 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
YIPF1Q9Y548 C2orf69P4-201ENST00000565394 541 ntBASIC21.59■■□□□ 1.05
YIPF1Q9Y548 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.59■■□□□ 1.05
YIPF1Q9Y548 SOX15-203ENST00000570788 1093 ntBASIC21.59■■□□□ 1.05
YIPF1Q9Y548 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.59■■□□□ 1.05
YIPF1Q9Y548 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.59■■□□□ 1.05
YIPF1Q9Y548 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
YIPF1Q9Y548 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
YIPF1Q9Y548 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
YIPF1Q9Y548 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
YIPF1Q9Y548 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
YIPF1Q9Y548 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
YIPF1Q9Y548 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
YIPF1Q9Y548 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
YIPF1Q9Y548 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
YIPF1Q9Y548 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
YIPF1Q9Y548 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.58■■□□□ 1.05
YIPF1Q9Y548 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.58■■□□□ 1.05
YIPF1Q9Y548 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
YIPF1Q9Y548 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
YIPF1Q9Y548 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
YIPF1Q9Y548 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
YIPF1Q9Y548 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.58■■□□□ 1.04
YIPF1Q9Y548 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms