Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.37■□□□□ 0.53
POLR1DQ9Y2S0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.37■□□□□ 0.53
POLR1DQ9Y2S0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1DQ9Y2S0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1DQ9Y2S0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1DQ9Y2S0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1DQ9Y2S0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1DQ9Y2S0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.36■□□□□ 0.53
POLR1DQ9Y2S0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1DQ9Y2S0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.36■□□□□ 0.53
POLR1DQ9Y2S0 YBX1P1-201ENST00000445822 960 ntBASIC18.36■□□□□ 0.53
POLR1DQ9Y2S0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1DQ9Y2S0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1DQ9Y2S0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.36■□□□□ 0.53
POLR1DQ9Y2S0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.36■□□□□ 0.53
POLR1DQ9Y2S0 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.36■□□□□ 0.53
POLR1DQ9Y2S0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1DQ9Y2S0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1DQ9Y2S0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1DQ9Y2S0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1DQ9Y2S0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1DQ9Y2S0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.35■□□□□ 0.53
POLR1DQ9Y2S0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
POLR1DQ9Y2S0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
POLR1DQ9Y2S0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1DQ9Y2S0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1DQ9Y2S0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
POLR1DQ9Y2S0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
POLR1DQ9Y2S0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
POLR1DQ9Y2S0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1DQ9Y2S0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1DQ9Y2S0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
POLR1DQ9Y2S0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.35■□□□□ 0.53
POLR1DQ9Y2S0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.35■□□□□ 0.53
POLR1DQ9Y2S0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.35■□□□□ 0.53
POLR1DQ9Y2S0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.35■□□□□ 0.53
POLR1DQ9Y2S0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1DQ9Y2S0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1DQ9Y2S0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1DQ9Y2S0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1DQ9Y2S0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.34■□□□□ 0.53
POLR1DQ9Y2S0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1DQ9Y2S0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
POLR1DQ9Y2S0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1DQ9Y2S0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.34■□□□□ 0.53
POLR1DQ9Y2S0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1DQ9Y2S0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1DQ9Y2S0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.34■□□□□ 0.53
POLR1DQ9Y2S0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1DQ9Y2S0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.34■□□□□ 0.53
POLR1DQ9Y2S0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1DQ9Y2S0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
POLR1DQ9Y2S0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
POLR1DQ9Y2S0 AC123595.1-201ENST00000440769 1046 ntBASIC18.34■□□□□ 0.53
POLR1DQ9Y2S0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1DQ9Y2S0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.34■□□□□ 0.53
POLR1DQ9Y2S0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1DQ9Y2S0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1DQ9Y2S0 AC121338.2-201ENST00000622535 1744 ntBASIC18.34■□□□□ 0.53
POLR1DQ9Y2S0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
POLR1DQ9Y2S0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
POLR1DQ9Y2S0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
POLR1DQ9Y2S0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLR1DQ9Y2S0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
POLR1DQ9Y2S0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.33■□□□□ 0.53
POLR1DQ9Y2S0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.33■□□□□ 0.53
POLR1DQ9Y2S0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLR1DQ9Y2S0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
POLR1DQ9Y2S0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
POLR1DQ9Y2S0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.33■□□□□ 0.53
POLR1DQ9Y2S0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
POLR1DQ9Y2S0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR1DQ9Y2S0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR1DQ9Y2S0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.33■□□□□ 0.52
POLR1DQ9Y2S0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR1DQ9Y2S0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR1DQ9Y2S0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.33■□□□□ 0.52
POLR1DQ9Y2S0 AC138907.5-202ENST00000569484 235 ntBASIC18.33■□□□□ 0.52
POLR1DQ9Y2S0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.33■□□□□ 0.52
POLR1DQ9Y2S0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
POLR1DQ9Y2S0 AC006128.1-201ENST00000624704 1661 ntBASIC18.33■□□□□ 0.52
POLR1DQ9Y2S0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR1DQ9Y2S0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
POLR1DQ9Y2S0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR1DQ9Y2S0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
POLR1DQ9Y2S0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
POLR1DQ9Y2S0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLR1DQ9Y2S0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.32■□□□□ 0.52
POLR1DQ9Y2S0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLR1DQ9Y2S0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.32■□□□□ 0.52
POLR1DQ9Y2S0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
POLR1DQ9Y2S0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
POLR1DQ9Y2S0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
POLR1DQ9Y2S0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.32■□□□□ 0.52
POLR1DQ9Y2S0 TERF1P2-201ENST00000583350 1212 ntBASIC18.32■□□□□ 0.52
POLR1DQ9Y2S0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLR1DQ9Y2S0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLR1DQ9Y2S0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLR1DQ9Y2S0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
POLR1DQ9Y2S0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms